RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 OTUD7AQ8TE49 926 aaPredicted RBP31.95■■■□□ 2.71
CDK9-202ENST00000421939 PTPN18Q99952 460 aa31.95■■■□□ 2.71
CDK9-202ENST00000421939 SAP30BPQ9UHR5 308 aaKnown RBP31.95■■■□□ 2.71
CDK9-202ENST00000421939 CTNND1O60716 968 aaKnown RBP31.94■■■□□ 2.7
CDK9-202ENST00000421939 PALD1Q9ULE6 856 aa31.94■■■□□ 2.7
CDK9-202ENST00000421939 CETPP11597 493 aa31.93■■■□□ 2.7
CDK9-202ENST00000421939 RWDD1Q9H446 243 aaPredicted RBP31.93■■■□□ 2.7
CDK9-202ENST00000421939 ERC2O15083 957 aa31.92■■■□□ 2.7
CDK9-202ENST00000421939 HLA-DOAP06340 250 aa31.92■■■□□ 2.7
CDK9-202ENST00000421939 MX1P20591 662 aa31.92■■■□□ 2.7
CDK9-202ENST00000421939 CRNKL1Q9BZJ0 848 aaKnown RBP31.92■■■□□ 2.7
CDK9-202ENST00000421939 DDX60LQ5H9U9 1706 aaKnown RBP31.92■■■□□ 2.7
CDK9-202ENST00000421939 MYH1P12882 1939 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 UBE3CQ15386 1083 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 SLFNL1Q499Z3 407 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 NOM1Q5C9Z4 860 aaKnown RBP31.91■■■□□ 2.7
CDK9-202ENST00000421939 ZSCAN25Q6NSZ9 544 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 LCORLQ8N3X6 602 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 KCNH4Q9UQ05 1017 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 NAV1Q8NEY1 1877 aa31.91■■■□□ 2.7
CDK9-202ENST00000421939 PTPRAP18433 802 aa31.9■■■□□ 2.7
CDK9-202ENST00000421939 KBTBD3Q8NAB2 608 aa31.9■■■□□ 2.7
CDK9-202ENST00000421939 PI4K2BQ8TCG2 481 aa31.9■■■□□ 2.7
CDK9-202ENST00000421939 R3HDMLQ9H3Y0 253 aa31.9■■■□□ 2.7
CDK9-202ENST00000421939 SALL3Q9BXA9 1300 aa31.9■■■□□ 2.7
CDK9-202ENST00000421939 GLRX3O76003 335 aaKnown RBP31.89■■■□□ 2.7
CDK9-202ENST00000421939 CHGBP05060 677 aa31.89■■■□□ 2.7
CDK9-202ENST00000421939 METTL16Q86W50 562 aaKnown RBP31.89■■■□□ 2.7
CDK9-202ENST00000421939 CRACR2BQ8N4Y2 399 aaPredicted RBP31.89■■■□□ 2.7
CDK9-202ENST00000421939 TRIM34Q9BYJ4 488 aa31.89■■■□□ 2.7
CDK9-202ENST00000421939 DNAJC18Q9H819 358 aa31.89■■■□□ 2.7
CDK9-202ENST00000421939 GPR25O00155 361 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 MBD4O95243 580 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 SLC4A8Q2Y0W8 1093 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 FOXP4Q8IVH2 680 aaPredicted RBP31.88■■■□□ 2.69
CDK9-202ENST00000421939 SMC5Q8IY18 1101 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 FAM43AQ8N2R8 423 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 ZHX2Q9Y6X8 837 aa31.88■■■□□ 2.69
CDK9-202ENST00000421939 CRHR2Q13324 411 aa31.87■■■□□ 2.69
CDK9-202ENST00000421939 ZNF296Q8WUU4 475 aaPredicted RBP31.87■■■□□ 2.69
CDK9-202ENST00000421939 ARMT1Q9H993 441 aa31.87■■■□□ 2.69
CDK9-202ENST00000421939 ATAD5Q96QE3 1844 aa31.86■■■□□ 2.69
CDK9-202ENST00000421939 CAP2P40123 477 aa31.86■■■□□ 2.69
CDK9-202ENST00000421939 IRX6P78412 446 aaPredicted RBP31.86■■■□□ 2.69
CDK9-202ENST00000421939 RRP1BQ14684 758 aaKnown RBP31.86■■■□□ 2.69
CDK9-202ENST00000421939 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.86■■■□□ 2.69
CDK9-202ENST00000421939 PHIPQ8WWQ0 1821 aa31.85■■■□□ 2.69
CDK9-202ENST00000421939 CXCL11O14625 94 aa31.85■■■□□ 2.69
CDK9-202ENST00000421939 IGHDP01880 384 aa31.85■■■□□ 2.69
CDK9-202ENST00000421939 ZCCHC17Q9NP64 241 aaKnown RBP31.85■■■□□ 2.69
CDK9-202ENST00000421939 BTBD19C9JJ37 291 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 TAF1CQ15572 869 aaPredicted RBP31.84■■■□□ 2.69
CDK9-202ENST00000421939 IFFO2Q5TF58 517 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 TTC6Q86TZ1 520 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 SDR42E1Q8WUS8 393 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 EHD4Q9H223 541 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 AFG3L2Q9Y4W6 797 aa31.84■■■□□ 2.69
CDK9-202ENST00000421939 CCDC84Q86UT8 332 aaPredicted RBP31.83■■■□□ 2.69
CDK9-202ENST00000421939 LNPKQ9C0E8 428 aa31.83■■■□□ 2.69
CDK9-202ENST00000421939 DCP1AQ9NPI6 582 aaPredicted RBP31.83■■■□□ 2.69
CDK9-202ENST00000421939 SERPINB13Q9UIV8 391 aa31.83■■■□□ 2.69
CDK9-202ENST00000421939 STAP2Q9UGK3 403 aa31.82■■■□□ 2.68
CDK9-202ENST00000421939 A0A0G2JLL6 359 aaPredicted RBP31.81■■■□□ 2.68
CDK9-202ENST00000421939 FKTNO75072 461 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 ZFYP08048 801 aaPredicted RBP31.81■■■□□ 2.68
CDK9-202ENST00000421939 DGKZQ13574 1117 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 MOGSQ13724 837 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 B4GALNT3Q6L9W6 998 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 PRRT2Q7Z6L0 340 aaPredicted RBP31.81■■■□□ 2.68
CDK9-202ENST00000421939 PUS7LQ9H0K6 701 aaKnown RBP31.81■■■□□ 2.68
CDK9-202ENST00000421939 ZFYVE28Q9HCC9 887 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 MCM9Q9NXL9 1143 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 PTPRFP10586 1907 aa31.81■■■□□ 2.68
CDK9-202ENST00000421939 TRIM75PA6NK02 468 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 PRKAB2O43741 272 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 POLR3DP05423 398 aaPredicted RBP31.8■■■□□ 2.68
CDK9-202ENST00000421939 PDE1AP54750 535 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 LRRFIP1Q32MZ4 808 aaKnown RBP31.8■■■□□ 2.68
CDK9-202ENST00000421939 ANKRD23Q86SG2 305 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 APPBP2Q92624 585 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 TBC1D2Q9BYX2 928 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 ATP8A2Q9NTI2 1148 aa31.8■■■□□ 2.68
CDK9-202ENST00000421939 RNF113AO15541 343 aaKnown RBP31.79■■■□□ 2.68
CDK9-202ENST00000421939 ASNSP08243 561 aa31.79■■■□□ 2.68
CDK9-202ENST00000421939 PLCD1P51178 756 aa31.79■■■□□ 2.68
CDK9-202ENST00000421939 MCOLN1Q9GZU1 580 aa31.79■■■□□ 2.68
CDK9-202ENST00000421939 GDF11O95390 407 aa31.78■■■□□ 2.68
CDK9-202ENST00000421939 CTU1Q7Z7A3 348 aaKnown RBP31.78■■■□□ 2.68
CDK9-202ENST00000421939 FSD1Q9BTV5 496 aa31.78■■■□□ 2.68
CDK9-202ENST00000421939 GINM1Q9NU53 330 aa31.78■■■□□ 2.68
CDK9-202ENST00000421939 USP17L5A8MUK1 530 aa31.77■■■□□ 2.68
CDK9-202ENST00000421939 NUCB1Q02818 461 aa31.77■■■□□ 2.68
CDK9-202ENST00000421939 FASTKD5Q7L8L6 764 aaKnown RBP31.77■■■□□ 2.68
CDK9-202ENST00000421939 CHD1LQ86WJ1 897 aa31.77■■■□□ 2.68
CDK9-202ENST00000421939 ZBTB21Q9ULJ3 1066 aa31.77■■■□□ 2.68
CDK9-202ENST00000421939 PDHXO00330 501 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 JAG1P78504 1218 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 TATDN1Q6P1N9 297 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 ZNF280CQ8ND82 737 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 OSBP2Q969R2 916 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 264.7 ms