RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SLF1Q9BQI6 1058 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 TFR2Q9UP52 801 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 FOXP2O15409 715 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 PPP6R2O75170 966 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 ZBTB3Q9H5J0 574 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 GUCA1BQ9UMX6 200 aa18.93■□□□□ 0.62
PKP4-204ENST00000421462 GPAA1O43292 621 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 ZAP70P43403 619 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 TRIM10Q9UDY6 481 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 PLEKHG2Q9H7P9 1386 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 RNF40O75150 1001 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
PKP4-204ENST00000421462 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
PKP4-204ENST00000421462 RRP12Q5JTH9 1297 aaKnown RBP18.92■□□□□ 0.62
PKP4-204ENST00000421462 GOLGA8AA7E2F4 631 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 MAGEA9P43362 315 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 HDAC6Q9UBN7 1215 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
PKP4-204ENST00000421462 NR1I3Q14994 352 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 CEP126Q9P2H0 1117 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 ANGEL1Q9UNK9 670 aaKnown RBP18.91■□□□□ 0.62
PKP4-204ENST00000421462 ZNF18P17022 549 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 GUCY1A2P33402 732 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 FXR1P51114 621 aaKnown RBP eCLIP18.91■□□□□ 0.62
PKP4-204ENST00000421462 NR5A1Q13285 461 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 VPS16Q9H269 839 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
PKP4-204ENST00000421462 SRGAP2O75044 1071 aa18.9■□□□□ 0.62
PKP4-204ENST00000421462 RABL6Q3YEC7 729 aaPredicted RBP18.9■□□□□ 0.62
PKP4-204ENST00000421462 FKBP15Q5T1M5 1219 aa18.9■□□□□ 0.62
PKP4-204ENST00000421462 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
PKP4-204ENST00000421462 NAPGQ99747 312 aaPredicted RBP18.9■□□□□ 0.62
PKP4-204ENST00000421462 KDM3BQ7LBC6 1761 aa18.9■□□□□ 0.62
PKP4-204ENST00000421462 ZBTB43O43298 467 aa18.9■□□□□ 0.62
PKP4-204ENST00000421462 TTC19Q6DKK2 380 aaPredicted RBP18.9■□□□□ 0.62
PKP4-204ENST00000421462 ENOX1Q8TC92 643 aaKnown RBP18.9■□□□□ 0.62
PKP4-204ENST00000421462 PCDHB6Q9Y5E3 794 aa18.9■□□□□ 0.62
PKP4-204ENST00000421462 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.62
PKP4-204ENST00000421462 MLKLQ8NB16 471 aa18.89■□□□□ 0.62
PKP4-204ENST00000421462 IDH1O75874 414 aaKnown RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 DNAJC21Q5F1R6 531 aaKnown RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 DACH1Q9UI36 760 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 MAPK8IP1Q9UQF2 711 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 RANBP6O60518 1105 aaKnown RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 GCP02774 474 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 IL15P40933 162 aaPredicted RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 LIG3P49916 1009 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 MRPS25P82663 173 aaKnown RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 DIS3L2Q8IYB7 885 aaKnown RBP18.89■□□□□ 0.61
PKP4-204ENST00000421462 RFX7Q2KHR2 1363 aa18.89■□□□□ 0.61
PKP4-204ENST00000421462 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 EYA2O00167 538 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 FOXO4P98177 505 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 MDM2Q00987 491 aaPredicted RBP18.88■□□□□ 0.61
PKP4-204ENST00000421462 TAF7LQ5H9L4 462 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 TTLL7Q6ZT98 887 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 FAM71BQ8TC56 605 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 HNRNPLLQ8WVV9 542 aaKnown RBP18.88■□□□□ 0.61
PKP4-204ENST00000421462 SMARCC1Q92922 1105 aaPredicted RBP18.88■□□□□ 0.61
PKP4-204ENST00000421462 CDKL5O76039 1030 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 TMEM67Q5HYA8 995 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.88■□□□□ 0.61
PKP4-204ENST00000421462 AFAP1L1Q8TED9 768 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 XAGE2Q96GT9 111 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 RAB21Q9UL25 225 aa18.88■□□□□ 0.61
PKP4-204ENST00000421462 CD44P16070 742 aaKnown RBP18.87■□□□□ 0.61
PKP4-204ENST00000421462 SAFBQ15424 915 aaKnown RBP eCLIP18.87■□□□□ 0.61
PKP4-204ENST00000421462 IQUBQ8NA54 791 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 MSANTD4Q8NCY6 345 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 DEF6Q9H4E7 631 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 hCG_1642624A0A1W2PR95 340 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 N4BP3O15049 544 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 FILIP1LQ4L180 1135 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 EPSTI1Q96J88 318 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 EHD4Q9H223 541 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 RNF225M0QZC1 329 aaPredicted RBP18.87■□□□□ 0.61
PKP4-204ENST00000421462 TOB1P50616 345 aaPredicted RBP18.87■□□□□ 0.61
PKP4-204ENST00000421462 SSRP1Q08945 709 aaKnown RBP18.87■□□□□ 0.61
PKP4-204ENST00000421462 MORC3Q14149 939 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 CTR9Q6PD62 1173 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 NOSTRINQ8IVI9 506 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 NUP133Q8WUM0 1156 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 PANX2Q96RD6 677 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 ACBD3Q9H3P7 528 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 SLC52A2Q9HAB3 445 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 CABP5Q9NP86 173 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 MYO6Q9UM54 1294 aa18.87■□□□□ 0.61
PKP4-204ENST00000421462 SLIT1O75093 1534 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms