RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 DUSP23Q9BVJ7 150 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 WNT10AQ9GZT5 417 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 MKNK2Q9HBH9 465 aa6.35□□□□□ -1.39
HMGB3P23-201ENST00000414981 CAP2P40123 477 aa6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 PWP1Q13610 501 aa6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 PHC3Q8NDX5 983 aa6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 ZC3H7BQ9UGR2 993 aaKnown RBP6.34□□□□□ -1.39
HMGB3P23-201ENST00000414981 LRIG2O94898 1065 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 LMNB2Q03252 620 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 SEPT6Q14141 434 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 FAM214BQ7L5A3 538 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 LRRC4CQ9HCJ2 640 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 TLR6Q9Y2C9 796 aa6.33□□□□□ -1.4
HMGB3P23-201ENST00000414981 ADAMTS4O75173 837 aa6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 LEFTY1O75610 366 aa6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 GP2P55259 537 aaKnown RBP6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 CAMK2GQ13555 558 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 HID1Q8IV36 788 aa6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 CCDC39Q9UFE4 941 aa6.32□□□□□ -1.4
HMGB3P23-201ENST00000414981 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 ZNF16P17020 682 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 CDK8P49336 464 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 SLBPQ14493 270 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 UBE3DQ7Z6J8 389 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 GTF2IRD1Q9UHL9 959 aa6.31□□□□□ -1.4
HMGB3P23-201ENST00000414981 FAM221AA4D161 298 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 PF4P02776 101 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 GBP2P32456 591 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 OXCT1P55809 520 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 PDE4BQ07343 736 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 NETO1Q8TDF5 533 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 MISP3Q96FF7 219 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 HEXIM2Q96MH2 286 aaKnown RBP6.3□□□□□ -1.4
HMGB3P23-201ENST00000414981 RBM47A0AV96 593 aaKnown RBP6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 CILPO75339 1184 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 EOMESO95936 686 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 GRK4P32298 578 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 ARMCX6Q7L4S7 300 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 ERMP1Q7Z2K6 904 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 RHOVQ96L33 236 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 VAV3Q9UKW4 847 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 ANGEL1Q9UNK9 670 aaKnown RBP6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
HMGB3P23-201ENST00000414981 CST3P01034 146 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 TRIM26Q12899 539 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 NKG7Q16617 165 aa6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 SLC6A19Q695T7 634 aa6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 BNC2Q6ZN30 1099 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 OAS3Q9Y6K5 1087 aaKnown RBP6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 ROBO2Q9HCK4 1378 aa6.28□□□□□ -1.4
HMGB3P23-201ENST00000414981 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 MINDY4BA8MYZ0 360 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 SLITRK5O94991 958 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 F13A1P00488 732 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRKCQQ04759 706 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 ARHGAP27Q6ZUM4 889 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 KCNQ5Q9NR82 932 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRR36Q9H6K5 1346 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 BPNT1O95861 308 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 PGRP06401 933 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 GARTP22102 1010 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 TMEM201Q5SNT2 666 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 LDLRAD1Q5T700 205 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 NFXL1Q6ZNB6 911 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 FAM181AQ8N9Y4 354 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 GOLM1Q8NBJ4 401 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 AGBL5Q8NDL9 886 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 TJP2Q9UDY2 1190 aa6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 MAPK8IP1Q9UQF2 711 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms