RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ARHGAP25P42331 645 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 MSANTD4Q8NCY6 345 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 PLIN2Q99541 437 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 SH2D4AQ9H788 454 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 MKRN1Q9UHC7 482 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 HAUS3Q68CZ6 603 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 KRT40Q6A162 431 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 V9GY48 417 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 POLR2DO15514 142 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 GSTA5Q7RTV2 222 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 NEO1Q92859 1461 aa15.35■□□□□ 0.05
SMARCA4-202ENST00000413806 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 GBP1P32455 592 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 TMTC1Q8IUR5 882 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 TMEM110-MUSTN1A8MSY1 372 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 TRAF5O00463 557 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 CFAP58Q5T655 872 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 CCDC26Q8TAB7 109 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 E7EWF7 191 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 FERP16591 822 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 ZBTB16Q05516 673 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 ZSCAN26Q16670 478 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 CACNA2D3Q8IZS8 1091 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 ZNF594Q96JF6 807 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 MYOM2P54296 1465 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 MYO5CQ9NQX4 1742 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 TTC37Q6PGP7 1564 aa15.34■□□□□ 0.05
SMARCA4-202ENST00000413806 POSTNQ15063 836 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 SPATA5Q8NB90 893 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 IFT81Q8WYA0 676 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 MAST3O60307 1309 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 CALUO43852 315 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 SEL1L2Q5TEA6 688 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 RGS22Q8NE09 1264 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 IQCDQ96DY2 449 aa15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 DDX23Q9BUQ8 820 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-202ENST00000413806 MAGI2Q86UL8 1455 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 RGS12O14924 1447 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 FAM173BQ6P4H8 233 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 JAKMIP2Q96AA8 810 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 TRIM7Q9C029 511 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 VPS16Q9H269 839 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 CEP120Q8N960 986 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 STMN2Q93045 179 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 PPP1R12CQ9BZL4 782 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 CSGALNACT2Q8N6G5 542 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
SMARCA4-202ENST00000413806 ME3Q16798 604 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 ATP6V0A2Q9Y487 856 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 DCAF17Q5H9S7 520 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 FAM114A2Q9NRY5 505 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 TMEM2Q9UHN6 1383 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 CCNT1O60563 726 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 CEP128Q6ZU80 1094 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 CALCOCO2Q13137 446 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 TSNAXIP1Q2TAA8 658 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 TRAPPC3LQ5T215 181 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 PPP1R9BQ96SB3 815 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 VCXQ9H320 206 aa15.32■□□□□ 0.04
SMARCA4-202ENST00000413806 NONOQ15233 471 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 USP44Q9H0E7 712 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ZNF532Q9HCE3 1301 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 A6NNZ2 444 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 JAK2O60674 1132 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 TUBB8Q3ZCM7 444 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 CNBD1Q8NA66 436 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 GOLGA6CA6NDK9 693 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 GOLGA6DP0CG33 693 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ZAP70P43403 619 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 GOLGA6AQ9NYA3 693 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 SAP30BPQ9UHR5 308 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 PPP1R7Q15435 360 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 KIFAP3Q92845 792 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms