RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 UBE3CQ15386 1083 aa22.04■■□□□ 1.12
RFC4-203ENST00000411792 CCL15Q16663 113 aa22.04■■□□□ 1.12
RFC4-203ENST00000411792 RIOK1Q9BRS2 568 aaKnown RBP22.04■■□□□ 1.12
RFC4-203ENST00000411792 PALD1Q9ULE6 856 aa22.04■■□□□ 1.12
RFC4-203ENST00000411792 MYO5AQ9Y4I1 1855 aaKnown RBP22.04■■□□□ 1.12
RFC4-203ENST00000411792 TCRBV5S4A2TA0A5A2 114 aa22.03■■□□□ 1.12
RFC4-203ENST00000411792 IRF6O14896 467 aa22.03■■□□□ 1.12
RFC4-203ENST00000411792 IRX6P78412 446 aaPredicted RBP22.03■■□□□ 1.12
RFC4-203ENST00000411792 FOXP4Q8IVH2 680 aaPredicted RBP22.03■■□□□ 1.12
RFC4-203ENST00000411792 KBTBD3Q8NAB2 608 aa22.03■■□□□ 1.12
RFC4-203ENST00000411792 TESPA1A2RU30 521 aaPredicted RBP22.02■■□□□ 1.12
RFC4-203ENST00000411792 CCDC85CA6NKD9 419 aa22.02■■□□□ 1.12
RFC4-203ENST00000411792 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
RFC4-203ENST00000411792 GPR25O00155 361 aa22.02■■□□□ 1.12
RFC4-203ENST00000411792 IGF2BP3O00425 579 aaKnown RBP eCLIP22.02■■□□□ 1.12
RFC4-203ENST00000411792 ZNF296Q8WUU4 475 aaPredicted RBP22.02■■□□□ 1.12
RFC4-203ENST00000411792 MS4A4AQ96JQ5 239 aa22.02■■□□□ 1.12
RFC4-203ENST00000411792 MBD4O95243 580 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 SLC4A8Q2Y0W8 1093 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 TTC6Q86TZ1 520 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 OTUD7AQ8TE49 926 aaPredicted RBP22.01■■□□□ 1.11
RFC4-203ENST00000411792 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
RFC4-203ENST00000411792 POLR3DP05423 398 aaPredicted RBP22■■□□□ 1.11
RFC4-203ENST00000411792 ZFYP08048 801 aaPredicted RBP22■■□□□ 1.11
RFC4-203ENST00000411792 SLURP2P0DP57 97 aa22■■□□□ 1.11
RFC4-203ENST00000411792 CTU1Q7Z7A3 348 aaKnown RBP22■■□□□ 1.11
RFC4-203ENST00000411792 LCORLQ8N3X6 602 aa22■■□□□ 1.11
RFC4-203ENST00000411792 PI4K2BQ8TCG2 481 aa22■■□□□ 1.11
RFC4-203ENST00000411792 BRI3BPQ8WY22 251 aa22■■□□□ 1.11
RFC4-203ENST00000411792 LNPKQ9C0E8 428 aa22■■□□□ 1.11
RFC4-203ENST00000411792 R3HDMLQ9H3Y0 253 aa22■■□□□ 1.11
RFC4-203ENST00000411792 ARMT1Q9H993 441 aa22■■□□□ 1.11
RFC4-203ENST00000411792 ZHX2Q9Y6X8 837 aa22■■□□□ 1.11
RFC4-203ENST00000411792 FKTNO75072 461 aa21.99■■□□□ 1.11
RFC4-203ENST00000411792 PTPRAP18433 802 aa21.99■■□□□ 1.11
RFC4-203ENST00000411792 AMOTL1Q8IY63 956 aa21.99■■□□□ 1.11
RFC4-203ENST00000411792 CFHR5Q9BXR6 569 aa21.99■■□□□ 1.11
RFC4-203ENST00000411792 IGHDP01880 384 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 CAP2P40123 477 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 SLFNL1Q499Z3 407 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 SDR42E1Q8WUS8 393 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 PTPN18Q99952 460 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 FSD1Q9BTV5 496 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 MCM9Q9NXL9 1143 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 SERPINB13Q9UIV8 391 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 KCNH4Q9UQ05 1017 aa21.98■■□□□ 1.11
RFC4-203ENST00000411792 CXCL11O14625 94 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 RNF113AO15541 343 aaKnown RBP21.97■■□□□ 1.11
RFC4-203ENST00000411792 TAF1CQ15572 869 aaPredicted RBP21.97■■□□□ 1.11
RFC4-203ENST00000411792 NOM1Q5C9Z4 860 aaKnown RBP21.97■■□□□ 1.11
RFC4-203ENST00000411792 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 APPBP2Q92624 585 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 TBC1D2Q9BYX2 928 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 ZFYVE28Q9HCC9 887 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 ATP8A2Q9NTI2 1148 aa21.97■■□□□ 1.11
RFC4-203ENST00000411792 PDE1AP54750 535 aa21.96■■□□□ 1.11
RFC4-203ENST00000411792 CRHR2Q13324 411 aa21.96■■□□□ 1.11
RFC4-203ENST00000411792 METTL16Q86W50 562 aaKnown RBP21.96■■□□□ 1.11
RFC4-203ENST00000411792 EHD4Q9H223 541 aa21.96■■□□□ 1.11
RFC4-203ENST00000411792 AS3MTQ9HBK9 375 aa21.96■■□□□ 1.11
RFC4-203ENST00000411792 ZCCHC17Q9NP64 241 aaKnown RBP21.96■■□□□ 1.11
RFC4-203ENST00000411792 DCP1AQ9NPI6 582 aaPredicted RBP21.96■■□□□ 1.11
RFC4-203ENST00000411792 SLC4A4Q9Y6R1 1079 aa21.96■■□□□ 1.11
RFC4-203ENST00000411792 LAMB1P07942 1786 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 FOCADQ5VW36 1801 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 ASNSP08243 561 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 FASTKD5Q7L8L6 764 aaKnown RBP21.95■■□□□ 1.1
RFC4-203ENST00000411792 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 PUS7LQ9H0K6 701 aaKnown RBP21.95■■□□□ 1.1
RFC4-203ENST00000411792 STAP2Q9UGK3 403 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 SALL3Q9BXA9 1300 aa21.95■■□□□ 1.1
RFC4-203ENST00000411792 TRIM75PA6NK02 468 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 USP17L5A8MUK1 530 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 BTBD19C9JJ37 291 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 CHGBP05060 677 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 NUCB1Q02818 461 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 DNAJC18Q9H819 358 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 GINM1Q9NU53 330 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 AFG3L2Q9Y4W6 797 aa21.94■■□□□ 1.1
RFC4-203ENST00000411792 DOCK1Q14185 1865 aa21.93■■□□□ 1.1
RFC4-203ENST00000411792 ANKRD23Q86SG2 305 aa21.93■■□□□ 1.1
RFC4-203ENST00000411792 EVI5LQ96CN4 794 aa21.93■■□□□ 1.1
RFC4-203ENST00000411792 CDK5RAP2Q96SN8 1893 aa21.93■■□□□ 1.1
RFC4-203ENST00000411792 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
RFC4-203ENST00000411792 A0A0G2JLL6 359 aaPredicted RBP21.92■■□□□ 1.1
RFC4-203ENST00000411792 PRKAB2O43741 272 aa21.92■■□□□ 1.1
RFC4-203ENST00000411792 PLCD1P51178 756 aa21.92■■□□□ 1.1
RFC4-203ENST00000411792 GADL1Q6ZQY3 521 aa21.92■■□□□ 1.1
RFC4-203ENST00000411792 PRRT2Q7Z6L0 340 aaPredicted RBP21.92■■□□□ 1.1
RFC4-203ENST00000411792 CCDC84Q86UT8 332 aaPredicted RBP21.92■■□□□ 1.1
RFC4-203ENST00000411792 ZNF280CQ8ND82 737 aa21.92■■□□□ 1.1
RFC4-203ENST00000411792 GDF11O95390 407 aa21.91■■□□□ 1.1
RFC4-203ENST00000411792 SPP2Q13103 211 aa21.91■■□□□ 1.1
RFC4-203ENST00000411792 RRP1BQ14684 758 aaKnown RBP21.91■■□□□ 1.1
RFC4-203ENST00000411792 PKN2Q16513 984 aaKnown RBP21.91■■□□□ 1.1
RFC4-203ENST00000411792 CERKLQ49MI3 558 aaPredicted RBP21.91■■□□□ 1.1
RFC4-203ENST00000411792 OSBP2Q969R2 916 aa21.91■■□□□ 1.1
RFC4-203ENST00000411792 ZBTB21Q9ULJ3 1066 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms