RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 HOXB4P17483 251 aaPredicted RBP6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 LIG1P18858 919 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 RING1Q06587 406 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 RASGRF1Q13972 1273 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 INTS3Q68E01 1043 aaKnown RBP6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 WDR89Q96FK6 387 aaPredicted RBP6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 TNKS2Q9H2K2 1166 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 REV1Q9UBZ9 1251 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 MAPK8IP1Q9UQF2 711 aa6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 MRPL42Q9Y6G3 142 aaKnown RBP6.01□□□□□ -1.45
RNU2-28P-201ENST00000410457 FAM221BA6H8Z2 402 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 ENPP3O14638 875 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 DLGAP3O95886 979 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 PLCG1P19174 1290 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 HSD3B2P26439 372 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 EXOSC6Q5RKV6 272 aaKnown RBP6□□□□□ -1.45
RNU2-28P-201ENST00000410457 CDCP2Q5VXM1 449 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 EGFLAMQ63HQ2 1017 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 OVOS1Q6IE37 1185 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 LYPD4Q6UWN0 246 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 TTC6Q86TZ1 520 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 FBXO11Q86XK2 927 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 ANTXR1Q9H6X2 564 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 KCNK4Q9NYG8 393 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 CORINQ9Y5Q5 1042 aa6□□□□□ -1.45
RNU2-28P-201ENST00000410457 A0A1W2PQH9 124 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 MEGF11A6BM72 1044 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 SLC22A31A6NKX4 558 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 DCDC2CA8MYV0 355 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 DLL1O00548 723 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 TNFRSF10CO14798 259 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 FANCGO15287 622 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 DDX3YO15523 660 aaKnown RBP5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 PDPK1O15530 556 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 RAC1P63000 192 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 ID3Q02535 119 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 PPP2R5EQ16537 467 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 TRAPPC3LQ5T215 181 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 LARP1BQ659C4 914 aaKnown RBP5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 RUFY4Q6ZNE9 571 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 NLRC3Q7RTR2 1065 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 ATG4CQ96DT6 458 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 RNPC3Q96LT9 517 aaKnown RBP5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 TMPRSS13Q9BYE2 586 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 WNT10AQ9GZT5 417 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 CNNM2Q9H8M5 875 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
RNU2-28P-201ENST00000410457 A0A0A0MRY4 1105 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 PRAMEF27A3QJZ7 478 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 ANKRD62A6NC57 917 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 GRK4P32298 578 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 DUOXA2Q1HG44 320 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 C12orf40Q86WS4 652 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 ZNF669Q96BR6 464 aaPredicted RBP5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 ENAMQ9NRM1 1142 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 RAD18Q9NS91 495 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 CRIM1Q9NZV1 1036 aa5.98□□□□□ -1.45
RNU2-28P-201ENST00000410457 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 SPDYE3A6NKU9 549 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 TMPRSS2O15393 492 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 DNAJA2O60884 412 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 GJB6O95452 261 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 PGRP06401 933 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ACRP10323 421 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 CCNFP41002 786 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ETF1P62495 437 aaKnown RBP5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 TCEAL1Q15170 157 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ZBTB37Q5TC79 503 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 SLFN12Q8IYM2 578 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ST13P5Q8NFI4 369 aaPredicted RBP5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 MICAL1Q8TDZ2 1067 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 UBASH3BQ8TF42 649 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ACSF2Q96CM8 615 aaPredicted RBP5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 RNF208Q9H0X6 261 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 PHAXQ9H814 394 aaKnown RBP5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 ST7Q9NRC1 585 aa5.97□□□□□ -1.45
RNU2-28P-201ENST00000410457 PIK3R2O00459 728 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 DDAH1O94760 285 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 CLSTN1O94985 981 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 NTF4P34130 210 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 YARSP54577 528 aaKnown RBP5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 NCAPHQ15003 741 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 PPM1JQ5JR12 505 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 ZNF662Q6ZS27 426 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 MCATQ8IVS2 390 aaKnown RBP5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 MRPL41Q8IXM3 137 aaKnown RBP5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 FAM178BQ8IXR5 827 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 KCT2Q8NC54 265 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 SMG8Q8ND04 991 aaKnown RBP5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 RNF214Q8ND24 703 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 DNAJC7Q99615 494 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 RUSC1Q9BVN2 902 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 ATXN3LQ9H3M9 355 aa5.96□□□□□ -1.46
RNU2-28P-201ENST00000410457 CYP4F12Q9HCS2 524 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms