RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ENC1O14682 589 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 ERCC3P19447 782 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 BMP6P22004 513 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 JAG1P78504 1218 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 RING1Q06587 406 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 TPTE2Q6XPS3 522 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 DNAJC14Q6Y2X3 702 aaPredicted RBP7.65□□□□□ -1.18
CLK1-203ENST00000409769 FAM168AQ92567 244 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 PLAGL2Q9UPG8 496 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 SPG7Q9UQ90 795 aa7.65□□□□□ -1.18
CLK1-203ENST00000409769 MAPK8P45983 427 aa7.64□□□□□ -1.19
CLK1-203ENST00000409769 CLCN7P51798 805 aa7.64□□□□□ -1.19
CLK1-203ENST00000409769 PPM1JQ5JR12 505 aa7.64□□□□□ -1.19
CLK1-203ENST00000409769 FRMD6Q96NE9 622 aa7.64□□□□□ -1.19
CLK1-203ENST00000409769 U3KQE9 123 aa7.64□□□□□ -1.19
CLK1-203ENST00000409769 ABCC9O60706 1549 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 CARMIL2Q6F5E8 1435 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 GNAT3A8MTJ3 354 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 FARP2O94887 1054 aaPredicted RBP7.63□□□□□ -1.19
CLK1-203ENST00000409769 ITIH2P19823 946 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 ZBTB37Q5TC79 503 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 FAM214BQ7L5A3 538 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 LRRN4CLQ8ND94 238 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 FLAD1Q8NFF5 587 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 ZNF507Q8TCN5 953 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 ELMO3Q96BJ8 720 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 HEXIM2Q96MH2 286 aaKnown RBP7.63□□□□□ -1.19
CLK1-203ENST00000409769 FAM8A1Q9UBU6 413 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 ADAMTS6Q9UKP5 1117 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 PCDHA4Q9UN74 947 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 MAPK8IP1Q9UQF2 711 aa7.63□□□□□ -1.19
CLK1-203ENST00000409769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
CLK1-203ENST00000409769 ARID1BQ8NFD5 2236 aaPredicted RBP7.62□□□□□ -1.19
CLK1-203ENST00000409769 LRIG2O94898 1065 aa7.62□□□□□ -1.19
CLK1-203ENST00000409769 NTF4P34130 210 aa7.62□□□□□ -1.19
CLK1-203ENST00000409769 GRIN3AQ8TCU5 1115 aa7.62□□□□□ -1.19
CLK1-203ENST00000409769 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 SPACA3Q8IXA5 215 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 OSBPL7Q9BZF2 842 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 C12orf49Q9H741 205 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 PRDM5Q9NQX1 630 aaPredicted RBP7.61□□□□□ -1.19
CLK1-203ENST00000409769 FAM53CQ9NYF3 392 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 CSADQ9Y600 493 aa7.61□□□□□ -1.19
CLK1-203ENST00000409769 ANKRD33BA6NCL7 494 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 CD96P40200 585 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 IKZF1Q13422 519 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 PKN1Q16512 942 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 C12orf40Q86WS4 652 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 NPAS4Q8IUM7 802 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 LMCD1Q9NZU5 365 aa7.6□□□□□ -1.19
CLK1-203ENST00000409769 DCAF1Q9Y4B6 1507 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 PAGE1O75459 146 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 CAP2P40123 477 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 FGD1P98174 961 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 PCNX4Q63HM2 1172 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
CLK1-203ENST00000409769 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 C22orf34Q6ZV56 151 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 SV2BQ7L1I2 683 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 HDXQ7Z353 690 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 BHLHE22Q8NFJ8 381 aaPredicted RBP7.59□□□□□ -1.19
CLK1-203ENST00000409769 SLC38A3Q99624 504 aa7.59□□□□□ -1.19
CLK1-203ENST00000409769 EOMESO95936 686 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
CLK1-203ENST00000409769 ZP2Q05996 745 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 NKPD1Q17RQ9 610 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 MFSD2AQ8NA29 543 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 COX4I2Q96KJ9 171 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
CLK1-203ENST00000409769 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 FBXO24O75426 580 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
CLK1-203ENST00000409769 ZNF648Q5T619 568 aaPredicted RBP7.57□□□□□ -1.2
CLK1-203ENST00000409769 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 ZSWIM9Q86XI8 627 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
CLK1-203ENST00000409769 USP17L7P0C7H9 530 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 AFMP43652 599 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 KCNMB1Q16558 191 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 CYFIP1Q7L576 1253 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 FAM84AQ96KN4 292 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 WNT10AQ9GZT5 417 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 MYO15BQ96JP2 1530 aa7.56□□□□□ -1.2
CLK1-203ENST00000409769 PRAMEF27A3QJZ7 478 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
CLK1-203ENST00000409769 CELA3AP09093 270 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 ZNF865P0CJ78 1059 aaPredicted RBP7.55□□□□□ -1.2
CLK1-203ENST00000409769 RPS26P62854 115 aaKnown RBP7.55□□□□□ -1.2
CLK1-203ENST00000409769 SFRP5Q5T4F7 317 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 FBXO33Q7Z6M2 555 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
CLK1-203ENST00000409769 FAM155AB1AL88 458 aaPredicted RBP7.54□□□□□ -1.2
CLK1-203ENST00000409769 EAPPQ56P03 285 aaPredicted RBP7.54□□□□□ -1.2
CLK1-203ENST00000409769 LRFN4Q6PJG9 635 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms