RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 DIS3L2Q8IYB7 885 aaKnown RBP18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 ABCA6Q8N139 1617 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 H7C1W4 665 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 CASQ1P31415 396 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 GYG1P46976 350 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 CEP135Q66GS9 1140 aa18.95■□□□□ 0.62
PCDHA13-202ENST00000409494 PPRC1Q5VV67 1664 aaKnown RBP18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 PROSER3Q2NL68 480 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 LETM2Q2VYF4 491 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 TYRO3Q06418 890 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 SNW1Q13573 536 aaKnown RBP18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 GPR162Q16538 588 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 SMTNP53814 917 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 LRRC24Q50LG9 513 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 VTI1AQ96AJ9 217 aa18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCDHA13-202ENST00000409494 H0YHG0 523 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 DDAH1O94760 285 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 USP8P40818 1118 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 GRAPQ13588 217 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 MSANTD4Q8NCY6 345 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 GRAPLQ8TC17 118 aaPredicted RBP18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 BCAMP50895 628 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 IRX3P78415 501 aaPredicted RBP18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 DDX12PQ92771 950 aa18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 GBP2P32456 591 aaPredicted RBP18.93■□□□□ 0.62
PCDHA13-202ENST00000409494 DNAJC25Q9H1X3 360 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 PRDM1O75626 825 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 BSDC1Q9NW68 430 aaPredicted RBP18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 EXOC7Q9UPT5 735 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 CDHR2Q9BYE9 1310 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 TTC38Q5R3I4 469 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
PCDHA13-202ENST00000409494 QRICH2Q9H0J4 1663 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 HSPD1P10809 573 aaKnown RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 ARID4AP29374 1257 aaPredicted RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 LUZP1Q86V48 1076 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 SKILP12757 684 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 ZSCAN10Q96SZ4 725 aaPredicted RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 ERICH4A6NGS2 130 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 IBSPP21815 317 aaPredicted RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 TAF3Q5VWG9 929 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 SULF1Q8IWU6 871 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 UBE2Q2Q8WVN8 375 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 DCPSQ96C86 337 aaKnown RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 BTDP43251 543 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 LMBR1Q8WVP7 490 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 CCDC102AQ96A19 550 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 MASTLQ96GX5 879 aa18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 MRPL11Q9Y3B7 192 aaKnown RBP18.91■□□□□ 0.62
PCDHA13-202ENST00000409494 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 RXRAP19793 462 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 VPS72Q15906 364 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 NLRX1Q86UT6 975 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 LMBRD1Q9NUN5 540 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 MED23Q9ULK4 1368 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 CCT6AP40227 531 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 TRIM28Q13263 835 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 MCF2L2Q86YR7 1114 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 IFT74Q96LB3 600 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 SUPT20HL1Q3ZLR7 823 aa18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 TRMT1LQ7Z2T5 733 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-202ENST00000409494 MTX1Q13505 466 aa18.89■□□□□ 0.62
PCDHA13-202ENST00000409494 GPATCH4Q5T3I0 446 aaKnown RBP18.89■□□□□ 0.62
PCDHA13-202ENST00000409494 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.62
PCDHA13-202ENST00000409494 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.62
PCDHA13-202ENST00000409494 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 KRT83P78385 493 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 KRT40Q6A162 431 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 ARHGAP27Q6ZUM4 889 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 TUBB4BP68371 445 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 TCP10Q12799 353 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 FCHSD1Q86WN1 690 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 DBNLQ9UJU6 430 aaKnown RBP18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 VWA3AA6NCI4 1184 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 FOSP01100 380 aaPredicted RBP18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 PHKA1P46020 1223 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 CDAN1Q8IWY9 1227 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 ZSWIM6Q9HCJ5 1215 aa18.89■□□□□ 0.61
PCDHA13-202ENST00000409494 PTPRMP28827 1452 aa18.88■□□□□ 0.61
PCDHA13-202ENST00000409494 POLA2Q14181 598 aa18.88■□□□□ 0.61
PCDHA13-202ENST00000409494 ZNF174Q15697 407 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms