RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-202ENST00000409031 HIP1RO75146 1068 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 MCM7P33993 719 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 PLCD1P51178 756 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 HYOU1Q9Y4L1 999 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 SLC4A4Q9Y6R1 1079 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-202ENST00000409031 LUC7L3O95232 432 aaKnown RBP19.74■□□□□ 0.75
SMPD4-202ENST00000409031 GNAT2P19087 354 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 DPCR1Q3MIW9 517 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 SLC9C1Q4G0N8 1177 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 CCDC84Q86UT8 332 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-202ENST00000409031 SLC35F6Q8N357 371 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
SMPD4-202ENST00000409031 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 CYP2E1P05181 493 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-202ENST00000409031 TNNI3KQ59H18 835 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 RNF10Q8N5U6 811 aaKnown RBP19.73■□□□□ 0.75
SMPD4-202ENST00000409031 FPGT-TNNI3KV9GXZ4 949 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 FLT4P35916 1363 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 AKAP4Q5JQC9 854 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 FERMT2Q96AC1 680 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 PSMB7Q99436 277 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 ZDHHC9Q9Y397 364 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 EPN1Q9Y6I3 576 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-202ENST00000409031 MAP3K5Q99683 1374 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 PLA2G4DQ86XP0 818 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 DSCC1Q9BVC3 393 aa19.73■□□□□ 0.75
SMPD4-202ENST00000409031 PEX19P40855 299 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 SH3BGRP55822 239 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-202ENST00000409031 ZNF174Q15697 407 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 SERTAD1Q9UHV2 236 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 SBNO2Q9Y2G9 1366 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 TBCAO75347 108 aaKnown RBP19.72■□□□□ 0.75
SMPD4-202ENST00000409031 RNASE9P60153 205 aaKnown RBP19.72■□□□□ 0.75
SMPD4-202ENST00000409031 SPATA1Q5VX52 437 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 KLHL7Q8IXQ5 586 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 MAP4K1Q92918 833 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-202ENST00000409031 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-202ENST00000409031 PPP2R5AQ15172 486 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 SIRT2Q8IXJ6 389 aa19.72■□□□□ 0.75
SMPD4-202ENST00000409031 CTNNA1P35221 906 aaKnown RBP19.71■□□□□ 0.75
SMPD4-202ENST00000409031 DZIP1Q86YF9 867 aaKnown RBP19.71■□□□□ 0.75
SMPD4-202ENST00000409031 MAPK8IP1Q9UQF2 711 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 CTIFO43310 598 aaKnown RBP19.71■□□□□ 0.75
SMPD4-202ENST00000409031 ZC3H6P61129 1189 aaKnown RBP19.71■□□□□ 0.75
SMPD4-202ENST00000409031 IFT88Q13099 833 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 RAPGEF1Q13905 1077 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 KRT79Q5XKE5 535 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMPD4-202ENST00000409031 WDR62O43379 1518 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 CEP104O60308 925 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 ADCK5Q3MIX3 580 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 ATP10BO94823 1461 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 PLEKHF1Q96S99 279 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 USP44Q9H0E7 712 aa19.71■□□□□ 0.75
SMPD4-202ENST00000409031 CHUKO15111 745 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 RPS6KA1Q15418 735 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 NELFBQ8WX92 580 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 DBNDD2Q9BQY9 259 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 TACO1Q9BSH4 297 aaKnown RBP19.7■□□□□ 0.74
SMPD4-202ENST00000409031 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
SMPD4-202ENST00000409031 RASSF2P50749 326 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 IFNL2Q8IZJ0 200 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 ACTR5Q9H9F9 607 aaPredicted RBP19.7■□□□□ 0.74
SMPD4-202ENST00000409031 ABCB6Q9NP58 842 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 PDE4DQ08499 809 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 CNNM4Q6P4Q7 775 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 ERMNQ8TAM6 284 aa19.7■□□□□ 0.74
SMPD4-202ENST00000409031 E7EWF7 191 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 SEPT6Q14141 434 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 VSTM4Q8IW00 320 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 NCAPGQ9BPX3 1015 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 NUCKS1Q9H1E3 243 aaKnown RBP19.69■□□□□ 0.74
SMPD4-202ENST00000409031 PCDHA5Q9Y5H7 936 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 KIF3CO14782 793 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 ARID5BQ14865 1188 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 SYCP2Q9BX26 1530 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 CLTAP09496 248 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 ATP5JP18859 108 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 GUCY2FP51841 1108 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 EPHB4P54760 987 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 CCDC170Q8IYT3 715 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 OSBPL5Q9H0X9 879 aaPredicted RBP19.69■□□□□ 0.74
SMPD4-202ENST00000409031 SAMM50Q9Y512 469 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 ERCC5P28715 1186 aaPredicted RBP19.69■□□□□ 0.74
SMPD4-202ENST00000409031 TNIP1Q15025 636 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 APPBP2Q92624 585 aa19.69■□□□□ 0.74
SMPD4-202ENST00000409031 CIB2O75838 187 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 ARMC9Q7Z3E5 817 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 SYCP3Q8IZU3 236 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 N4BP2L2Q92802 583 aaPredicted RBP19.68■□□□□ 0.74
SMPD4-202ENST00000409031 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMPD4-202ENST00000409031 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 ARHGAP24Q8N264 748 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 CCDC63Q8NA47 563 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 MIPOL1Q8TD10 442 aa19.68■□□□□ 0.74
SMPD4-202ENST00000409031 EYA1Q99502 592 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms