RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
PTPRM-203ENST00000400060 A0A1B0GVL5 298 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CLTAP09496 248 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
PTPRM-203ENST00000400060 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
PTPRM-203ENST00000400060 NKIRAS1Q9NYS0 192 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 SYNRGQ9UMZ2 1314 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CCDC160A6NGH7 325 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
PTPRM-203ENST00000400060 PFKFB2O60825 505 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 CMA1P23946 247 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 AMPD3Q01432 767 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 UBXN1Q04323 297 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 NNTQ13423 1086 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 RRAGBQ5VZM2 374 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 SMC6Q96SB8 1091 aa11.13□□□□□ -0.63
PTPRM-203ENST00000400060 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 USP27XA6NNY8 438 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 FERP16591 822 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 ADCY2Q08462 1091 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 NOX5Q96PH1 765 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 YIPF3Q9GZM5 350 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 PSMA7O14818 248 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 ATP5HO75947 161 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 SUN1O94901 812 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 ATF3P18847 181 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 DDR1Q08345 913 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 COG1Q8WTW3 980 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 FUT8Q9BYC5 575 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 PRC1O43663 620 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 LMNB2Q03252 620 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 BIRC3Q13489 604 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 IQCGQ9H095 443 aaKnown RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 EPN3Q9H201 632 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 RCOR1Q9UKL0 485 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 NOL3O60936 208 aaKnown RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 FLIIQ13045 1269 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 FYB2Q5VWT5 728 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 FBXW10Q5XX13 1052 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 OLFM3Q96PB7 478 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 PARP2Q9UGN5 583 aa11.12□□□□□ -0.63
PTPRM-203ENST00000400060 PAIP2BQ9ULR5 123 aaKnown RBP11.12□□□□□ -0.63
PTPRM-203ENST00000400060 SLC27A2O14975 620 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 MRPS35P82673 323 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 PREPLQ4J6C6 727 aaPredicted RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NFE2L3Q9Y4A8 694 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 CETN2P41208 172 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.637e-8■■■■■ 186.3
PTPRM-203ENST00000400060 KLHL14Q9P2G3 628 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ZNF518AQ6AHZ1 1483 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ESCO1Q5FWF5 840 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 TRIM68Q6AZZ1 485 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NLRP14Q86W24 1093 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NME9Q86XW9 330 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 SLC35F6Q8N357 371 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NME8Q8N427 588 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■■■■ 56.2
PTPRM-203ENST00000400060 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 TUBB6Q9BUF5 446 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 SCP2P22307 547 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 PSEN1P49768 467 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 ATP1A2P50993 1020 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 NACAP1Q9BZK3 213 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
PTPRM-203ENST00000400060 UTP11Q9Y3A2 253 aaKnown RBP11.11□□□□□ -0.63
PTPRM-203ENST00000400060 STAMBPO95630 424 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 HIBCHQ6NVY1 386 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 VSIG1Q86XK7 387 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 PLVAPQ9BX97 442 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 VCPKMTQ9H867 229 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-203ENST00000400060 ADGRL3Q9HAR2 1447 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
PTPRM-203ENST00000400060 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms