RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 NR1I2O75469 434 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 POLR3DP05423 398 aaPredicted RBP29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 NLGN1Q8N2Q7 840 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 RTN4Q9NQC3 1192 aaKnown RBP29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 GJB4Q9NTQ9 266 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 LDHCP07864 332 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 ME1P48163 572 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 RBM43Q6ZSC3 357 aaKnown RBP29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 CCAR1Q8IX12 1150 aaKnown RBP29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 FANCBQ8NB91 859 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 KCNG4Q8TDN1 519 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 AIFM3Q96NN9 605 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 CD209Q9NNX6 404 aa29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.92■■■□□ 2.38
SHARPIN-202ENST00000398712 IL1R1P14778 569 aa29.91■■■□□ 2.38
SHARPIN-202ENST00000398712 CAMK4Q16566 473 aa29.91■■■□□ 2.38
SHARPIN-202ENST00000398712 CCDC73Q6ZRK6 1079 aa29.91■■■□□ 2.38
SHARPIN-202ENST00000398712 NOL10Q9BSC4 688 aaKnown RBP29.91■■■□□ 2.38
SHARPIN-202ENST00000398712 KIF28PB7ZC32 967 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 BAG3O95817 575 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 STK38Q15208 465 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 ZNF827Q17R98 1081 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 CERS3Q8IU89 383 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 LINC00301Q8NCQ3 95 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 FLAD1Q8NFF5 587 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 AKT1S1Q96B36 256 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 GPR101Q96P66 508 aaPredicted RBP29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 NRXN2Q9P2S2 1712 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 SMIM22K7EJ46 135 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 APBA3O96018 575 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 NT5C2P49902 561 aa29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 GNL2Q13823 731 aaKnown RBP29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 ENAHQ8N8S7 591 aaPredicted RBP29.9■■■□□ 2.38
SHARPIN-202ENST00000398712 ANKRD31Q8N7Z5 1873 aa29.89■■■□□ 2.38
SHARPIN-202ENST00000398712 PDE4BQ07343 736 aa29.89■■■□□ 2.38
SHARPIN-202ENST00000398712 IFIT1BQ5T764 474 aaKnown RBP29.89■■■□□ 2.38
SHARPIN-202ENST00000398712 NUP133Q8WUM0 1156 aa29.89■■■□□ 2.38
SHARPIN-202ENST00000398712 SF3A1Q15459 793 aaKnown RBP29.88■■■□□ 2.37
SHARPIN-202ENST00000398712 CATIPQ7Z7H3 387 aa29.88■■■□□ 2.37
SHARPIN-202ENST00000398712 CLIC4Q9Y696 253 aa29.88■■■□□ 2.37
SHARPIN-202ENST00000398712 LTBP1Q14766 1721 aa29.88■■■□□ 2.37
SHARPIN-202ENST00000398712 PRDM1O75626 825 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 DEXIO95424 95 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 CALM1P0DP23 149 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 CALM2P0DP24 149 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 CALM3P0DP25 149 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 PPP4CP60510 307 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 HS1BP3Q53T59 392 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 ADALQ6DHV7 355 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 SP8Q8IXZ3 490 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 CRACR2BQ8N4Y2 399 aaPredicted RBP29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 TBC1D16Q8TBP0 767 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 A0A1W2PQ27 194 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 A0A1W2PQ64 194 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 A0A1W2PQD8 194 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 PPEF1O14829 653 aaPredicted RBP29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 CTAGE5O15320 804 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 USP5P45974 858 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 ANO1Q5XXA6 986 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 MCM9Q9NXL9 1143 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 PCDHA7Q9UN72 937 aa29.87■■■□□ 2.37
SHARPIN-202ENST00000398712 SPTLC2O15270 562 aa29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 U2AF2P26368 475 aaKnown RBP eCLIP29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 FAM160A1Q05DH4 1040 aa29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 NBPF11Q86T75 865 aa29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 COL23A1Q86Y22 540 aaPredicted RBP29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 MROH7-TTC4A0A0A0MT08 1334 aa29.86■■■□□ 2.37
SHARPIN-202ENST00000398712 TYRO3Q06418 890 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 AMOTL1Q8IY63 956 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 FSIP1Q8NA03 581 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 RBM28Q9NW13 759 aaKnown RBP29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 POLLQ9UGP5 575 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 SAFBQ15424 915 aaKnown RBP eCLIP29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 CKAP2LQ8IYA6 745 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 MRPS27Q92552 414 aaKnown RBP29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 GOLPH3LQ9H4A5 285 aa29.85■■■□□ 2.37
SHARPIN-202ENST00000398712 NAV1Q8NEY1 1877 aa29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 ESPNB1AK53 854 aa29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 DDAH1O94760 285 aa29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 SH3RF3Q8TEJ3 882 aaPredicted RBP29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 TBC1D22AQ8WUA7 517 aa29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 RNF26Q9BY78 433 aaPredicted RBP29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 MKRN1Q9UHC7 482 aaKnown RBP29.84■■■□□ 2.37
SHARPIN-202ENST00000398712 C6orf229H3BNL8 230 aa29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 KINO60870 393 aaKnown RBP29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 CYP2D6P10635 497 aa29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 DIXDC1Q155Q3 683 aa29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 ATP6V0A2Q9Y487 856 aa29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 MYH6P13533 1939 aa29.83■■■□□ 2.37
SHARPIN-202ENST00000398712 GRIK5Q16478 980 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 C12orf60Q5U649 245 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 SASS6Q6UVJ0 657 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 SLF2Q8IX21 1173 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 ENGASEQ8NFI3 743 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 RRAGDQ9NQL2 400 aaPredicted RBP29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 MMP1P03956 469 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 NPR1P16066 1061 aa29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 AKAP17AQ02040 695 aaKnown RBP29.82■■■□□ 2.36
SHARPIN-202ENST00000398712 SNW1Q13573 536 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms