RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 POLR3EQ9NVU0 708 aa17.75■□□□□ 0.43
MBD1-209ENST00000398495 USP25Q9UHP3 1055 aa17.75■□□□□ 0.43
MBD1-209ENST00000398495 NAV1Q8NEY1 1877 aa17.75■□□□□ 0.43
MBD1-209ENST00000398495 EP400Q96L91 3159 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 YEATS4O95619 227 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
MBD1-209ENST00000398495 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 ATP8A2Q9NTI2 1148 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 ATP2B4P23634 1241 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
MBD1-209ENST00000398495 RCAN1P53805 252 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 TMED8Q6PL24 325 aaPredicted RBP17.74■□□□□ 0.43
MBD1-209ENST00000398495 CCDC73Q6ZRK6 1079 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 GGA1Q9UJY5 639 aa17.74■□□□□ 0.43
MBD1-209ENST00000398495 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
MBD1-209ENST00000398495 TRIM29Q14134 588 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 DIXDC1Q155Q3 683 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 ENGASEQ8NFI3 743 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 ARPP21Q9UBL0 812 aaPredicted RBP17.73■□□□□ 0.43
MBD1-209ENST00000398495 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 MYH6P13533 1939 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 ORC4O43929 436 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
MBD1-209ENST00000398495 SBK1Q52WX2 424 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 ANO1Q5XXA6 986 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 CCDC82Q8N4S0 544 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
MBD1-209ENST00000398495 KCNG4Q8TDN1 519 aa17.73■□□□□ 0.43
MBD1-209ENST00000398495 SH3RF3Q8TEJ3 882 aaPredicted RBP17.73■□□□□ 0.43
MBD1-209ENST00000398495 SPTLC2O15270 562 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 FAM160A1Q05DH4 1040 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
MBD1-209ENST00000398495 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 MRPS27Q92552 414 aaKnown RBP17.72■□□□□ 0.43
MBD1-209ENST00000398495 WASF1Q92558 559 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 CRAMP1Q96RY5 1269 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 CD209Q9NNX6 404 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 CDK5RAP2Q96SN8 1893 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 KLRG2A4D1S0 409 aaPredicted RBP17.72■□□□□ 0.43
MBD1-209ENST00000398495 BBOX1O75936 387 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 TRIM22Q8IYM9 498 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
MBD1-209ENST00000398495 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■□□□ 12.2
MBD1-209ENST00000398495 RBM6P78332 1123 aaKnown RBP17.71■□□□□ 0.43
MBD1-209ENST00000398495 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
MBD1-209ENST00000398495 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 HS1BP3Q53T59 392 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
MBD1-209ENST00000398495 AKT1S1Q96B36 256 aa17.71■□□□□ 0.43
MBD1-209ENST00000398495 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
MBD1-209ENST00000398495 COL11A2P13942 1736 aaPredicted RBP17.7■□□□□ 0.42
MBD1-209ENST00000398495 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 NMT2O60551 498 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 IL1R1P14778 569 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 GSTO1P78417 241 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 ADALQ6DHV7 355 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
MBD1-209ENST00000398495 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
MBD1-209ENST00000398495 TBC1D16Q8TBP0 767 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 FAM200AQ8TCP9 573 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 PODXL2Q9NZ53 605 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
MBD1-209ENST00000398495 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 MROH7-TTC4A0A0A0MT08 1334 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 PPEF1O14829 653 aaPredicted RBP17.7■□□□□ 0.42
MBD1-209ENST00000398495 AP5Z1O43299 807 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 CLCN1P35523 988 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 USP5P45974 858 aa17.7■□□□□ 0.42
MBD1-209ENST00000398495 A0A1B0GVL5 298 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 DEXIO95424 95 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 ADCY5O95622 1261 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 MMP1P03956 469 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 CATIPQ7Z7H3 387 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 DDX60LQ5H9U9 1706 aaKnown RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 IGSF3O75054 1194 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 PLEKHA8P1O95397 391 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 APBA3O96018 575 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 NDUFA8P51970 172 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 RTFDC1Q9BY42 306 aaPredicted RBP17.69■□□□□ 0.42
MBD1-209ENST00000398495 CBX8Q9HC52 389 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 CCDC39Q9UFE4 941 aa17.69■□□□□ 0.42
MBD1-209ENST00000398495 FUT2Q10981 343 aa17.68■□□□□ 0.42
MBD1-209ENST00000398495 PTPAQ15257 358 aa17.68■□□□□ 0.42
MBD1-209ENST00000398495 C12orf60Q5U649 245 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms