RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 MTMR6Q9Y217 621 aa21.53■■□□□ 1.04
MBD1-208ENST00000398493 SCN4AP35499 1836 aa21.53■■□□□ 1.04
MBD1-208ENST00000398493 CLRN2A0PK11 232 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 FOXP2O15409 715 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 PFKFB2O60825 505 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 LDHCP07864 332 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 GNAT2P19087 354 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 MCM5P33992 734 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 ALX1Q15699 326 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 CDC42EP5Q6NZY7 148 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 SLF2Q8IX21 1173 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 ZNF274Q96GC6 653 aaPredicted RBP21.52■■□□□ 1.04
MBD1-208ENST00000398493 STRBPQ96SI9 672 aaKnown RBP21.52■■□□□ 1.04
MBD1-208ENST00000398493 KIF3AQ9Y496 699 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 PATL2C9JE40 543 aaKnown RBP21.52■■□□□ 1.04
MBD1-208ENST00000398493 CACNB3P54284 484 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 RHBDL3P58872 404 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 HAND2P61296 217 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 RIOK1Q9BRS2 568 aaKnown RBP21.52■■□□□ 1.04
MBD1-208ENST00000398493 LRRC2Q9BYS8 371 aa21.52■■□□□ 1.04
MBD1-208ENST00000398493 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
MBD1-208ENST00000398493 WDR19Q8NEZ3 1342 aa21.51■■□□□ 1.03
MBD1-208ENST00000398493 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
MBD1-208ENST00000398493 KIF3CO14782 793 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 MRE11P49959 708 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 PPP4CP60510 307 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 SH3RF3Q8TEJ3 882 aaPredicted RBP21.5■■□□□ 1.03
MBD1-208ENST00000398493 USP40Q9NVE5 1235 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 MAST2Q6P0Q8 1798 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 ZMYM6O95789 1325 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 ANGEL2Q5VTE6 544 aaKnown RBP21.5■■□□□ 1.03
MBD1-208ENST00000398493 PNMA8AQ86V59 439 aaPredicted RBP21.5■■□□□ 1.03
MBD1-208ENST00000398493 LCORLQ8N3X6 602 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 ARMT1Q9H993 441 aa21.5■■□□□ 1.03
MBD1-208ENST00000398493 ZNF70Q9UC06 446 aaPredicted RBP21.5■■□□□ 1.03
MBD1-208ENST00000398493 HMGN5P82970 282 aaKnown RBP21.49■■□□□ 1.03
MBD1-208ENST00000398493 APOBRQ0VD83 1088 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 NFIAQ12857 509 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 SPDYE2Q495Y8 402 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 CAVIN1Q6NZI2 390 aaKnown RBP21.49■■□□□ 1.03
MBD1-208ENST00000398493 FAM184AQ8NB25 1140 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 TMEM87AQ8NBN3 555 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 GGA3Q9NZ52 723 aa21.49■■□□□ 1.03
MBD1-208ENST00000398493 MAGEB6P1A0A0J9YX57 407 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 MBD4O95243 580 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 FOXD4L6Q3SYB3 417 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 TMED8Q6PL24 325 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 FOXD4L3Q6VB84 417 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 SYAP1Q96A49 352 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 PRC1O43663 620 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 BAG3O95817 575 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 SCRN1Q12765 414 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 DLK2Q6UY11 383 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 CHAMP1Q96JM3 812 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 NAPBQ9H115 298 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 VEZTQ9HBM0 779 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
MBD1-208ENST00000398493 NAP1L2Q9ULW6 460 aaPredicted RBP21.48■■□□□ 1.03
MBD1-208ENST00000398493 PRKAB2O43741 272 aa21.47■■□□□ 1.03
MBD1-208ENST00000398493 WDHD1O75717 1129 aaPredicted RBP21.47■■□□□ 1.03
MBD1-208ENST00000398493 EVCP57679 992 aa21.47■■□□□ 1.03
MBD1-208ENST00000398493 GPT2Q8TD30 523 aa21.47■■□□□ 1.03
MBD1-208ENST00000398493 CLEC11AQ9Y240 323 aa21.47■■□□□ 1.03
MBD1-208ENST00000398493 MYO1BO43795 1136 aa21.46■■□□□ 1.03
MBD1-208ENST00000398493 DHX16O60231 1041 aaKnown RBP21.46■■□□□ 1.03
MBD1-208ENST00000398493 PDIA3P30101 505 aaKnown RBP21.46■■□□□ 1.03
MBD1-208ENST00000398493 IFNL3Q8IZI9 196 aa21.46■■□□□ 1.03
MBD1-208ENST00000398493 SMARCC2Q8TAQ2 1214 aa21.46■■□□□ 1.03
MBD1-208ENST00000398493 DDX4Q9NQI0 724 aaKnown RBP21.46■■□□□ 1.03
MBD1-208ENST00000398493 TCP10L2B9ZVM9 353 aa21.45■■□□□ 1.03
MBD1-208ENST00000398493 MAP1SQ66K74 1059 aaPredicted RBP21.45■■□□□ 1.03
MBD1-208ENST00000398493 CHST3Q7LGC8 479 aa21.45■■□□□ 1.03
MBD1-208ENST00000398493 ZC3H15Q8WU90 426 aaKnown RBP21.45■■□□□ 1.03
MBD1-208ENST00000398493 NOL10Q9BSC4 688 aaKnown RBP21.45■■□□□ 1.03
MBD1-208ENST00000398493 H3BQV1 296 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 ZNF445P59923 1031 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 TEX11Q8IYF3 940 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 FAM198AQ9UFP1 575 aa21.45■■□□□ 1.02
MBD1-208ENST00000398493 TGFBRAP1Q8WUH2 860 aa21.44■■□□□ 1.02
MBD1-208ENST00000398493 SDR42E1Q8WUS8 393 aa21.44■■□□□ 1.02
MBD1-208ENST00000398493 GRPEL1Q9HAV7 217 aa21.44■■□□□ 1.02
MBD1-208ENST00000398493 CNPY2Q9Y2B0 182 aa21.44■■□□□ 1.02
MBD1-208ENST00000398493 SLC4A4Q9Y6R1 1079 aa21.44■■□□□ 1.02
MBD1-208ENST00000398493 PICALMQ13492 652 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 ZSCAN23Q3MJ62 389 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 LDHDQ86WU2 507 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 IDI2Q9BXS1 227 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 CNNM2Q9H8M5 875 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 JAK2O60674 1132 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 CCT2P78371 535 aaKnown RBP21.43■■□□□ 1.02
MBD1-208ENST00000398493 KRT85P78386 507 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 TCP10Q12799 353 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 PRAMEF18Q5VWM3 479 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 MAPKAPK5Q8IW41 473 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms