RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 IRS2Q9Y4H2 1338 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 MYH2Q9UKX2 1941 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 WDHD1O75717 1129 aaPredicted RBP19.43■□□□□ 0.7
NUP50-202ENST00000396096 HIBADHP31937 336 aaKnown RBP19.43■□□□□ 0.7
NUP50-202ENST00000396096 DYNLL1P63167 89 aaKnown RBP19.43■□□□□ 0.7
NUP50-202ENST00000396096 GNL2Q13823 731 aaKnown RBP19.43■□□□□ 0.7
NUP50-202ENST00000396096 CRACR2BQ8N4Y2 399 aaPredicted RBP19.43■□□□□ 0.7
NUP50-202ENST00000396096 FANCBQ8NB91 859 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 SDF4Q9BRK5 362 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 KIAA1468Q9P260 1216 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 MYH6P13533 1939 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 MINDY4BA8MYZ0 360 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 ZNF202O95125 648 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 DEXIO95424 95 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 MMP1P03956 469 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 KLRK1P26718 216 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.7
NUP50-202ENST00000396096 CEP57L1Q8IYX8 460 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 TRIM5Q9C035 493 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 HPSEQ9Y251 543 aa19.43■□□□□ 0.7
NUP50-202ENST00000396096 MROH7-TTC4A0A0A0MT08 1334 aa19.42■□□□□ 0.7
NUP50-202ENST00000396096 TNKSO95271 1327 aa19.42■□□□□ 0.7
NUP50-202ENST00000396096 PFKFB1P16118 471 aa19.42■□□□□ 0.7
NUP50-202ENST00000396096 DHX40Q8IX18 779 aaKnown RBP19.42■□□□□ 0.7
NUP50-202ENST00000396096 SPC24Q8NBT2 197 aa19.42■□□□□ 0.7
NUP50-202ENST00000396096 BPIFA3Q9BQP9 254 aa19.42■□□□□ 0.7
NUP50-202ENST00000396096 NAT10Q9H0A0 1025 aaKnown RBP19.42■□□□□ 0.7
NUP50-202ENST00000396096 MECOMQ03112 1051 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 AMIGO3Q86WK7 504 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 NOSTRINQ8IVI9 506 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 KIAA1524Q8TCG1 905 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 FOXP1Q9H334 677 aaPredicted RBP19.41■□□□□ 0.7
NUP50-202ENST00000396096 UBE2Q2LH0YL09 131 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 CUTAO60888 179 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 GUCY1A2P33402 732 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
NUP50-202ENST00000396096 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
NUP50-202ENST00000396096 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 MRFAP1L1Q96HT8 127 aa19.41■□□□□ 0.7
NUP50-202ENST00000396096 ZSCAN10Q96SZ4 725 aaPredicted RBP19.41■□□□□ 0.7
NUP50-202ENST00000396096 ORC4O43929 436 aa19.4■□□□□ 0.7
NUP50-202ENST00000396096 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
NUP50-202ENST00000396096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.4■□□□□ 0.7
NUP50-202ENST00000396096 R3HCC1Q9Y3T6 440 aaKnown RBP19.4■□□□□ 0.7
NUP50-202ENST00000396096 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.7
NUP50-202ENST00000396096 MARCKSP29966 332 aaPredicted RBP19.39■□□□□ 0.7
NUP50-202ENST00000396096 RESP18Q5W5W9 173 aa19.39■□□□□ 0.7
NUP50-202ENST00000396096 ENAHQ8N8S7 591 aaPredicted RBP19.39■□□□□ 0.7
NUP50-202ENST00000396096 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
NUP50-202ENST00000396096 DIS3L2Q8IYB7 885 aaKnown RBP19.39■□□□□ 0.69
NUP50-202ENST00000396096 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
NUP50-202ENST00000396096 CRNKL1Q9BZJ0 848 aaKnown RBP19.39■□□□□ 0.69
NUP50-202ENST00000396096 ATP8A2Q9NTI2 1148 aa19.39■□□□□ 0.69
NUP50-202ENST00000396096 TFCP2L1Q9NZI6 479 aa19.39■□□□□ 0.69
NUP50-202ENST00000396096 BECN2A8MW95 431 aa19.38■□□□□ 0.69
NUP50-202ENST00000396096 SMIM22K7EJ46 135 aa19.38■□□□□ 0.69
NUP50-202ENST00000396096 PTGS1P23219 599 aa19.38■□□□□ 0.69
NUP50-202ENST00000396096 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
NUP50-202ENST00000396096 TRAPPC3LQ5T215 181 aa19.38■□□□□ 0.69
NUP50-202ENST00000396096 BTBD18B2RXH4 712 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 CALM1P0DP23 149 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 CALM2P0DP24 149 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 CALM3P0DP25 149 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 RFC4P35249 363 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 SYKP43405 635 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 NLRP12P59046 1061 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 FUT2Q10981 343 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 RILPL1Q5EBL4 403 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 SPTY2D1Q68D10 685 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 IQCA1Q86XH1 822 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 ELOA2Q8IYF1 753 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 NUP133Q8WUM0 1156 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 GJD4Q96KN9 370 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 DCP1AQ9NPI6 582 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 RBM28Q9NW13 759 aaKnown RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 PYCARDQ9ULZ3 195 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 MORC2Q9Y6X9 1032 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 CYP2D7A0A087X1C5 515 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 USP17L21D6R901 530 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 DDAH1O94760 285 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 NT5C2P49902 561 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 TOB1P50616 345 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 GRAPQ13588 217 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 CCDC186Q7Z3E2 898 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 GRAPLQ8TC17 118 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 ERCC4Q92889 916 aaPredicted RBP19.37■□□□□ 0.69
NUP50-202ENST00000396096 TUBE1Q9UJT0 475 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
NUP50-202ENST00000396096 ADRA2BP18089 450 aa19.36■□□□□ 0.69
NUP50-202ENST00000396096 ZRSR1Q15695 479 aaKnown RBP19.36■□□□□ 0.69
NUP50-202ENST00000396096 IFIT1BQ5T764 474 aaKnown RBP19.36■□□□□ 0.69
NUP50-202ENST00000396096 CATIPQ7Z7H3 387 aa19.36■□□□□ 0.69
NUP50-202ENST00000396096 DRC7Q8IY82 874 aa19.36■□□□□ 0.69
NUP50-202ENST00000396096 CCDC24Q8N4L8 307 aa19.36■□□□□ 0.69
NUP50-202ENST00000396096 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
NUP50-202ENST00000396096 CLIP2Q9UDT6 1046 aa19.36■□□□□ 0.69
NUP50-202ENST00000396096 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms