RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 CCDC96Q2M329 555 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CCDC24Q8N4L8 307 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 NUP88Q99567 741 aaPredicted RBP7.47□□□□□ -1.21
BDNF-203ENST00000395978 TANGO6Q9C0B7 1094 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 DEF6Q9H4E7 631 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CPDO75976 1380 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CSF1RP07333 972 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 MCM7P33993 719 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 LRMPQ12912 555 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 KIF4BQ2VIQ3 1234 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 CALML4Q96GE6 196 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 TCEAL9Q9UHQ7 104 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 DNAI1Q9UI46 699 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 TNKSO95271 1327 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 MON2Q7Z3U7 1717 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 ABCC12Q96J65 1359 aa7.47□□□□□ -1.21
BDNF-203ENST00000395978 STX17P56962 302 aa7.46□□□□□ -1.21
BDNF-203ENST00000395978 CBX1P83916 185 aa7.46□□□□□ -1.21
BDNF-203ENST00000395978 TMCO3Q6UWJ1 677 aa7.46□□□□□ -1.21
BDNF-203ENST00000395978 NOC3LQ8WTT2 800 aaKnown RBP7.46□□□□□ -1.21
BDNF-203ENST00000395978 VPS54Q9P1Q0 977 aa7.46□□□□□ -1.21
BDNF-203ENST00000395978 KDM6AO15550 1401 aaPredicted RBP7.46□□□□□ -1.21
BDNF-203ENST00000395978 hCG_1642624A0A1W2PR95 340 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 SNAP23O00161 211 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 PRKAB2O43741 272 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 IFNAR1P17181 557 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 NAPAP54920 295 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 FKBP15Q5T1M5 1219 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 CMTR1Q8N1G2 835 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 ZNF397Q8NF99 534 aaPredicted RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 ZSCAN10Q96SZ4 725 aaPredicted RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 XPO4Q9C0E2 1151 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 MEGF6O75095 1541 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 RIOK3O14730 519 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 SLU7O95391 586 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 POSTNQ15063 836 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 TTC38Q5R3I4 469 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 KIAA1328Q86T90 577 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 C6orf50Q9HD87 102 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
BDNF-203ENST00000395978 WDR19Q8NEZ3 1342 aa7.46□□□□□ -1.22
BDNF-203ENST00000395978 PPP6R2O75170 966 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 ERLIN1O75477 346 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 FGFR1OPO95684 399 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 HLA-DOAP06340 250 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 PCP11498 1178 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 IDEP14735 1019 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 PNOCQ13519 176 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 LCORLQ8N3X6 602 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 KIAA1524Q8TCG1 905 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 FERMT2Q96AC1 680 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 TRIM47Q96LD4 638 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 ZC3H12CQ9C0D7 883 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 PYCARDQ9ULZ3 195 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 THRAP3Q9Y2W1 955 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 NFE2L3Q9Y4A8 694 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.45□□□□□ -1.22
BDNF-203ENST00000395978 SOS2Q07890 1332 aaPredicted RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 MST1RQ04912 1400 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 NWD1Q149M9 1564 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 PSMA7O14818 248 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 GNA11P29992 359 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 MTIF2P46199 727 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 PIK3AP1Q6ZUJ8 805 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 C11orf57Q6ZUT1 292 aaPredicted RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 TBC1D10CQ8IV04 446 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 AIFM3Q96NN9 605 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 CLIC6Q96NY7 704 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 NRBP1Q9UHY1 535 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 SEMA3EO15041 775 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 MYO1BO43795 1136 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 FMNL1O95466 1100 aaPredicted RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 TFAP4Q01664 338 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 ALX1Q15699 326 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 CLEC4GQ6UXB4 293 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 KRBA2Q6ZNG9 492 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 TEX11Q8IYF3 940 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 IL17RAQ96F46 866 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 TIGD1Q96MW7 591 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.45□□□□□ -1.22
BDNF-203ENST00000395978 GJB4Q9NTQ9 266 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 TMOD2Q9NZR1 351 aa7.45□□□□□ -1.22
BDNF-203ENST00000395978 ARPP21Q9UBL0 812 aaPredicted RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
BDNF-203ENST00000395978 UFL1O94874 794 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 CASP7P55210 303 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 FAM47AQ5JRC9 791 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 SYT10Q6XYQ8 523 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 TXLNBQ8N3L3 684 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 CNKSR2Q8WXI2 1034 aa7.44□□□□□ -1.22
BDNF-203ENST00000395978 RRP36Q96EU6 259 aaKnown RBP7.44□□□□□ -1.22
BDNF-203ENST00000395978 FOXP1Q9H334 677 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms