RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ZNF174Q15697 407 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 DSCC1Q9BVC3 393 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 ZNF521Q96K83 1311 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 YTHDC2Q9H6S0 1430 aaKnown RBP19.22■□□□□ 0.67
SIN3A-203ENST00000394949 ATP2A2P16615 1042 aaKnown RBP19.22■□□□□ 0.67
SIN3A-203ENST00000394949 CUL4AQ13619 759 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 SLC9C1Q4G0N8 1177 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 KRT40Q6A162 431 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 PCDH11XQ9BZA7 1347 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 PCDH11YQ9BZA8 1340 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 MAGEA1P43355 309 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 TAOK1Q7L7X3 1001 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 TTC6Q86TZ1 520 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 TRIML1Q8N9V2 468 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 ZNF274Q96GC6 653 aaPredicted RBP19.22■□□□□ 0.67
SIN3A-203ENST00000394949 PTPRTO14522 1441 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 SARNPP82979 210 aaKnown RBP19.22■□□□□ 0.67
SIN3A-203ENST00000394949 PDE4DQ08499 809 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 SLF1Q9BQI6 1058 aa19.22■□□□□ 0.67
SIN3A-203ENST00000394949 VGLL3A8MV65 326 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 TSNAXIP1Q2TAA8 658 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 TRMT1LQ7Z2T5 733 aaKnown RBP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 CCDC84Q86UT8 332 aaPredicted RBP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 CCDC25Q86WR0 208 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 NUCKS1Q9H1E3 243 aaKnown RBP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 MRVI1Q9Y6F6 885 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 CCDC160A6NGH7 325 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 PCK1P35558 622 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 RAPGEF1Q13905 1077 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 EDC4Q6P2E9 1401 aaKnown RBP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 EYA2O00167 538 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 PLCB1Q9NQ66 1216 aa19.21■□□□□ 0.67
SIN3A-203ENST00000394949 NSFL1CQ9UNZ2 370 aaKnown RBP19.21■□□□□ 0.67
SIN3A-203ENST00000394949 TRAF5O00463 557 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 STX10O60499 249 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 OSBPL3Q9H4L5 887 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 MAGEB6Q8N7X4 407 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 CMA1P23946 247 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 CDCA7Q9BWT1 371 aaPredicted RBP19.2■□□□□ 0.66
SIN3A-203ENST00000394949 TAB2Q9NYJ8 693 aa19.2■□□□□ 0.66
SIN3A-203ENST00000394949 TRIM58Q8NG06 486 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 CCDC110Q8TBZ0 833 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 DBNDD2Q9BQY9 259 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 KAT6BQ8WYB5 2073 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 B4E1Z4 1266 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 PFKFB1P16118 471 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 OTUD7BQ6GQQ9 843 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 HAUS4Q9H6D7 363 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 APBA1Q02410 837 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 OR8K1Q8NGG5 319 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 F8W031 263 aaPredicted RBP19.19■□□□□ 0.66
SIN3A-203ENST00000394949 TTC38Q5R3I4 469 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 HELBQ8NG08 1087 aaPredicted RBP19.19■□□□□ 0.66
SIN3A-203ENST00000394949 WDR66Q8TBY9 1149 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 CSRNP2Q9H175 543 aa19.19■□□□□ 0.66
SIN3A-203ENST00000394949 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 PFKFB2O60825 505 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 USP28Q96RU2 1077 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 TMEM110-MUSTN1A8MSY1 372 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 CIB2O75838 187 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 GNGT1P63211 74 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 EYA3Q99504 573 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 PHLPP2Q6ZVD8 1323 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 FAM13AO94988 1023 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 ADKP55263 362 aaKnown RBP19.18■□□□□ 0.66
SIN3A-203ENST00000394949 FYB2Q5VWT5 728 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 SMARCC2Q8TAQ2 1214 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 METTL22Q9BUU2 404 aaPredicted RBP19.18■□□□□ 0.66
SIN3A-203ENST00000394949 STAP2Q9UGK3 403 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 USP19O94966 1318 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 ATP5JP18859 108 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 ASIC2Q16515 512 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 PARP10Q53GL7 1025 aa19.18■□□□□ 0.66
SIN3A-203ENST00000394949 E7EVH7 732 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 PNMA8AQ86V59 439 aaPredicted RBP19.17■□□□□ 0.66
SIN3A-203ENST00000394949 PPP1R13BQ96KQ4 1090 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 PLBD2Q8NHP8 589 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 CAPS2Q9BXY5 557 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 CAPN7Q9Y6W3 813 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 LDHBP07195 334 aaKnown RBP19.17■□□□□ 0.66
SIN3A-203ENST00000394949 PICALMQ13492 652 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 SYCE1Q8N0S2 351 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 BICD1Q96G01 975 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 VCXQ9H320 206 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.17■□□□□ 0.66
SIN3A-203ENST00000394949 TPCN1Q9ULQ1 816 aa19.17■□□□□ 0.66
SIN3A-203ENST00000394949 B4DLN1 442 aa19.16■□□□□ 0.66
SIN3A-203ENST00000394949 MBD4O95243 580 aa19.16■□□□□ 0.66
SIN3A-203ENST00000394949 MRPL12P52815 198 aaKnown RBP19.16■□□□□ 0.66
SIN3A-203ENST00000394949 NELFBQ8WX92 580 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms