RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 THSD7AQ9UPZ6 1657 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 B4E1Z4 1266 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
RTN4-206ENST00000394611 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 ACSBG1Q96GR2 724 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 INCENPQ9NQS7 918 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 SAMSN1Q9NSI8 373 aaKnown RBP10.03□□□□□ -0.8
RTN4-206ENST00000394611 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 SRGAP2O75044 1071 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 CCDC57Q2TAC2 916 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 TAB2Q9NYJ8 693 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
RTN4-206ENST00000394611 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 ANO1Q5XXA6 986 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 KCNG4Q8TDN1 519 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 PCDHA5Q9Y5H7 936 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
RTN4-206ENST00000394611 KDM6AO15550 1401 aaPredicted RBP10.03□□□□□ -0.8
RTN4-206ENST00000394611 CDC25AP30304 524 aa10.02□□□□□ -0.8
RTN4-206ENST00000394611 MAP9Q49MG5 647 aa10.02□□□□□ -0.8
RTN4-206ENST00000394611 RRAGBQ5VZM2 374 aa10.02□□□□□ -0.8
RTN4-206ENST00000394611 NBPF11Q86T75 865 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 DHX40Q8IX18 779 aaKnown RBP10.02□□□□□ -0.81
RTN4-206ENST00000394611 ABCB6Q9NP58 842 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
RTN4-206ENST00000394611 VIRMAQ69YN4 1812 aaKnown RBP10.02□□□□□ -0.81
RTN4-206ENST00000394611 ST3GAL1Q11201 340 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 RESTQ13127 1097 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 NECTIN1Q15223 517 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 TDRD12Q587J7 1177 aaKnown RBP10.02□□□□□ -0.81
RTN4-206ENST00000394611 HDXQ7Z353 690 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 SLC35F6Q8N357 371 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 FUCA2Q9BTY2 467 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 JAG2Q9Y219 1238 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 JRKLQ9Y4A0 524 aa10.02□□□□□ -0.81
RTN4-206ENST00000394611 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 CXCR5P32302 372 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 TRMT1LQ7Z2T5 733 aaKnown RBP10.01□□□□□ -0.81
RTN4-206ENST00000394611 NFATC2IPQ8NCF5 419 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 EBAG9O00559 213 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 NSUN7Q8NE18 718 aaKnown RBP10.01□□□□□ -0.81
RTN4-206ENST00000394611 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 DCAF5Q96JK2 942 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 CABP5Q9NP86 173 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 E7EWF7 191 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 UBE2Q2LH0YL09 131 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 BACH1O14867 736 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 TAF5LO75529 589 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 PRDM1O75626 825 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 CYP2C19P33261 490 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 IQCB1Q15051 598 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 CCDC96Q2M329 555 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 METTL24Q5JXM2 366 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 MYSM1Q5VVJ2 828 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 CC2D1AQ6P1N0 951 aaPredicted RBP10.01□□□□□ -0.81
RTN4-206ENST00000394611 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 HMG20BQ9P0W2 317 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 MAGEC2Q9UBF1 373 aaPredicted RBP10.01□□□□□ -0.81
RTN4-206ENST00000394611 DBNLQ9UJU6 430 aaKnown RBP10.01□□□□□ -0.81
RTN4-206ENST00000394611 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
RTN4-206ENST00000394611 RANBP6O60518 1105 aaKnown RBP10□□□□□ -0.81
RTN4-206ENST00000394611 SASH1O94885 1247 aa10□□□□□ -0.81
RTN4-206ENST00000394611 CAVIN2O95810 425 aa10□□□□□ -0.81
RTN4-206ENST00000394611 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
RTN4-206ENST00000394611 SND1Q7KZF4 910 aaKnown RBP eCLIP10□□□□□ -0.813e-12■■■■□ 21.6
RTN4-206ENST00000394611 PTF1AQ7RTS3 328 aa10□□□□□ -0.81
RTN4-206ENST00000394611 VPS37DQ86XT2 251 aa10□□□□□ -0.81
RTN4-206ENST00000394611 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
RTN4-206ENST00000394611 ZNHIT6Q9NWK9 470 aaKnown RBP10□□□□□ -0.81
RTN4-206ENST00000394611 STAP2Q9UGK3 403 aa10□□□□□ -0.81
RTN4-206ENST00000394611 CTNND2Q9UQB3 1225 aa10□□□□□ -0.81
RTN4-206ENST00000394611 NDUFAB1O14561 156 aa10□□□□□ -0.81
RTN4-206ENST00000394611 KCNQ2O43526 872 aa10□□□□□ -0.81
RTN4-206ENST00000394611 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
RTN4-206ENST00000394611 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
RTN4-206ENST00000394611 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
RTN4-206ENST00000394611 GNL3LQ9NVN8 582 aaKnown RBP10□□□□□ -0.81
RTN4-206ENST00000394611 ZKSCAN7Q9P0L1 754 aaPredicted RBP10□□□□□ -0.81
RTN4-206ENST00000394611 FHOD1Q9Y613 1164 aa10□□□□□ -0.81
RTN4-206ENST00000394611 A0A0U1RQJ8 604 aa10□□□□□ -0.81
RTN4-206ENST00000394611 VWA3AA6NCI4 1184 aa10□□□□□ -0.81
RTN4-206ENST00000394611 NLRP12P59046 1061 aa10□□□□□ -0.81
RTN4-206ENST00000394611 E2F5Q15329 346 aa10□□□□□ -0.81
RTN4-206ENST00000394611 KSR2Q6VAB6 950 aa10□□□□□ -0.81
RTN4-206ENST00000394611 BCAS4Q8TDM0 211 aa10□□□□□ -0.81
RTN4-206ENST00000394611 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
RTN4-206ENST00000394611 CAPN7Q9Y6W3 813 aa10□□□□□ -0.81
RTN4-206ENST00000394611 AKR1B15C9JRZ8 316 aaPredicted RBP10□□□□□ -0.81
RTN4-206ENST00000394611 UBXN1Q04323 297 aa10□□□□□ -0.81
RTN4-206ENST00000394611 ZNF174Q15697 407 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms