RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 ANGEL1Q9UNK9 670 aaKnown RBP9.96□□□□□ -0.82
GAPVD1-204ENST00000394083 WASHC4Q2M389 1173 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 ZSCAN31Q96LW9 406 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 CCDC158Q5M9N0 1113 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 AKNAD1Q5T1N1 836 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 AATFQ9NY61 560 aaKnown RBP eCLIP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 A0A1B0GVL5 298 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 HSP90AA1P07900 732 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 SPECC1Q5M775 1068 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 PCDHB6Q9Y5E3 794 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 BTBD18B2RXH4 712 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 PPP1R11O60927 126 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 PPARAQ07869 468 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 LRMPQ12912 555 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 DPCR1Q3MIW9 517 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 CCDC152Q4G0S7 254 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 FAM47AQ5JRC9 791 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 FAM43AQ8N2R8 423 aa9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 LLPHQ9BRT6 129 aaKnown RBP9.95□□□□□ -0.82
GAPVD1-204ENST00000394083 RGL2O15211 777 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 CLCN1P35523 988 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 PDS5AQ29RF7 1337 aaKnown RBP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 IL1R1P14778 569 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 MCCP23508 829 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 QTRT2Q9H974 415 aaKnown RBP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 CBX8Q9HC52 389 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 KIAA1217Q5T5P2 1943 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 TAL1P17542 331 aaPredicted RBP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 LIFRP42702 1097 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 TTC12Q9H892 705 aaPredicted RBP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 GRAMD1CQ8IYS0 662 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 RTEL1Q9NZ71 1219 aa9.94□□□□□ -0.82
GAPVD1-204ENST00000394083 USP17L3A6NCW0 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 USP17L4A6NCW7 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 SLC5A1P13866 664 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 TXNRD1Q16881 649 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 USP17L1Q7RTZ2 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 DPF2Q92785 391 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 TNKSO95271 1327 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 USP27XA6NNY8 438 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 GOLGA8BA8MQT2 603 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 USP17L21D6R901 530 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 SRGNP10124 158 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 GABPAQ06546 454 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 CRACR2BQ8N4Y2 399 aaPredicted RBP9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 ZNF213O14771 459 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 TBC1D16Q8TBP0 767 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 CLSTN2Q9H4D0 955 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 FBXO2Q9UK22 296 aaPredicted RBP9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
GAPVD1-204ENST00000394083 A0A0U1RQJ8 604 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 YDJCA8MPS7 323 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 C15orf52Q6ZUT6 534 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 SPATA20Q8TB22 786 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 ATRIPQ8WXE1 791 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 NOL7Q9UMY1 257 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 ESPNB1AK53 854 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 KRT40Q6A162 431 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 TSC1Q92574 1164 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 MAD2L2Q9UI95 211 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 MCM5P33992 734 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 LONRF3Q496Y0 759 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 CCDC82Q8N4S0 544 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 PGAP2Q9UHJ9 254 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 NFIAQ12857 509 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 CCDC183Q5T5S1 534 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 PHF20Q9BVI0 1012 aa9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-204ENST00000394083 PSMA5P28066 241 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 TYRO3Q06418 890 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 GRAPQ13588 217 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 GRAPLQ8TC17 118 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 GAKO14976 1311 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 ATRNL1Q5VV63 1379 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 A0A0G2JMZ2 1700 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 LRRC37A2A6NM11 1700 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 POLD1P28340 1107 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 NCOA7Q8NI08 942 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 DICER1Q9UPY3 1922 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 A0A0G2JS52 829 aa9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 RNF225M0QZC1 329 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-204ENST00000394083 MYT1Q01538 1121 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms