RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TET3O43151 1660 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 MYOM2P54296 1465 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 A0A087WWV3 80 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 ZNF202O95125 648 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 ZFYP08048 801 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CPA1P15085 419 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 MYL5Q02045 173 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 USP4Q13107 963 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CDC37L1Q7L3B6 337 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC13Q8IYE1 715 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 C8orf58Q8NAV2 365 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 SAMD15Q9P1V8 674 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 TRPC6Q9Y210 931 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 RGS12O14924 1447 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 ZMYND10O75800 440 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 MYL6BP14649 208 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 PRPF4BQ13523 1007 aaKnown RBP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 MAP7Q14244 749 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC93Q567U6 631 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC129Q6ZRS4 1044 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 LRRC59Q96AG4 307 aaKnown RBP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 WDR24Q96S15 920 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 STK38LQ9Y2H1 464 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 CHMLP26374 656 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 ADKP55263 362 aaKnown RBP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 SF3A3Q12874 501 aaKnown RBP eCLIP8.54□□□□□ -1.04
VTI1A-201ENST00000393077 DRP2Q13474 957 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 RTL1A6NKG5 1358 aa8.54□□□□□ -1.04
VTI1A-201ENST00000393077 MAP2K7O14733 419 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 DIAPH2O60879 1101 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 SURF6O75683 361 aaKnown RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 HNRNPCP07910 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 KCNJ6P48051 423 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 SH3BGRP55822 239 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 GOLGA8FQ08AF8 430 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 GOLGA8DPQ0D2H9 430 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 RAB11FIP4Q86YS3 637 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 TTC21AQ8NDW8 1320 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 EME2A4GXA9 379 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC160A6NGH7 325 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 AKR1B15C9JRZ8 316 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 AHCYL1O43865 530 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 STX10O60499 249 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 GNAI2P04899 355 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 PAX3P23760 479 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 RNF10Q8N5U6 811 aaKnown RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 ANKRD44Q8N8A2 993 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 TEKT4Q8WW24 435 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 EYA1Q99502 592 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 FSBPO95073 299 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 GNAI3P08754 354 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 PSMC4P43686 418 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 HOOK3Q86VS8 718 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 DRAXINQ8NBI3 349 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 BRF1Q92994 677 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 NSRP1Q9H0G5 558 aaKnown RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC113Q9H0I3 377 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 MMADHCQ9H3L0 296 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-201ENST00000393077 VIPAS39Q9H9C1 493 aa8.53□□□□□ -1.04
VTI1A-201ENST00000393077 MAGEA8P43361 318 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.04
VTI1A-201ENST00000393077 TCERG1LQ5VWI1 586 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 HINFPQ9BQA5 517 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 VCPKMTQ9H867 229 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.04
VTI1A-201ENST00000393077 ANXA1P04083 346 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 OATP04181 439 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 ROR2Q01974 943 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 SEPT6Q14141 434 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 PLCB4Q15147 1175 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 TBC1D1Q86TI0 1168 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 COG1Q8WTW3 980 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 IFT81Q8WYA0 676 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 NAA15Q9BXJ9 866 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 DDX20Q9UHI6 824 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 TRIM35Q9UPQ4 493 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 VIRMAQ69YN4 1812 aaKnown RBP8.52□□□□□ -1.05
VTI1A-201ENST00000393077 A0A1B0GVL5 298 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 STXBP3O00186 592 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 YEATS4O95619 227 aa8.52□□□□□ -1.05
VTI1A-201ENST00000393077 IFIT2P09913 472 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms