RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 FAN1Q9Y2M0 1017 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 SLF2Q8IX21 1173 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 ITIH3Q06033 890 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 RASIP1Q5U651 963 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 MIER3Q7Z3K6 550 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 MLKLQ8NB16 471 aa17.98■□□□□ 0.47
SHANK1-204ENST00000391814 RNF40O75150 1001 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 CRCPO75575 148 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 PKP1Q13835 747 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 CUTAO60888 179 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 RILPQ96NA2 401 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 KLHL14Q9P2G3 628 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 TBC1D8O95759 1140 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 CROCCP2Q86T23 111 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 KRT15P19012 456 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
SHANK1-204ENST00000391814 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
SHANK1-204ENST00000391814 GRM8O00222 908 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 SH3BP5O60239 455 aa17.97■□□□□ 0.47
SHANK1-204ENST00000391814 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-204ENST00000391814 TRPC3Q13507 836 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 WHAMMQ8TF30 809 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 BLZF1Q9H2G9 400 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 RPS6KA1Q15418 735 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 GEN1Q17RS7 908 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 CCDC13Q8IYE1 715 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 BAG3O95817 575 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 CALML3P27482 149 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 CCDC14Q49A88 953 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 CSRNP2Q9H175 543 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 BRD1O95696 1058 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 LONRF2Q1L5Z9 754 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 CNNM4Q6P4Q7 775 aa17.96■□□□□ 0.47
SHANK1-204ENST00000391814 IQSEC3Q9UPP2 1182 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-204ENST00000391814 MAGEB6Q8N7X4 407 aa17.96■□□□□ 0.46
SHANK1-204ENST00000391814 MAGEA1P43355 309 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 RASA3Q14644 834 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 CCDC105Q8IYK2 499 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 IFIH1Q9BYX4 1025 aaKnown RBP17.95■□□□□ 0.46
SHANK1-204ENST00000391814 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 SLC9C1Q4G0N8 1177 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 PHLDB3Q6NSJ2 640 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 CHAMP1Q96JM3 812 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 SLC52A1Q9NWF4 448 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 TNNI2P48788 182 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 FRMD4BQ9Y2L6 1034 aa17.95■□□□□ 0.46
SHANK1-204ENST00000391814 JAK2O60674 1132 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 GOLGA8FQ08AF8 430 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 GOLGA8DPQ0D2H9 430 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 PIK3AP1Q6ZUJ8 805 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 LLPHQ9BRT6 129 aaKnown RBP17.94■□□□□ 0.46
SHANK1-204ENST00000391814 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHANK1-204ENST00000391814 BUB1O43683 1085 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 VAMP4O75379 141 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 ANKRD20A3Q5VUR7 823 aa17.94■□□□□ 0.46
SHANK1-204ENST00000391814 TROVE2P10155 538 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHANK1-204ENST00000391814 TMED1Q13445 227 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 IMPG2Q9BZV3 1241 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 VPS37BQ9H9H4 285 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 SLC24A3Q9HC58 644 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 ZPR1O75312 459 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 CDC25BP30305 580 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 MIGA1Q8NAN2 632 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 RPGRIP1Q96KN7 1286 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 PEX26Q7Z412 305 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 CCT6BQ92526 530 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 PPP1R9AQ9ULJ8 1098 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 ATP2B3Q16720 1220 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 PTPROQ16827 1216 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 SFMBT2Q5VUG0 894 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
SHANK1-204ENST00000391814 GNAQP50148 359 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
SHANK1-204ENST00000391814 SH3BGRP55822 239 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-204ENST00000391814 POLE2P56282 527 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 PRR16Q569H4 304 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 SYCE1Q8N0S2 351 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 RAB17Q9H0T7 212 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
SHANK1-204ENST00000391814 NOS1P29475 1434 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 KIFAP3Q92845 792 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 HELLSQ9NRZ9 838 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 ZBTB21Q9ULJ3 1066 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 A0A087WUV0 522 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-204ENST00000391814 LRRC23Q53EV4 343 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-204ENST00000391814 MCTP2Q6DN12 878 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-204ENST00000391814 CALUO43852 315 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-204ENST00000391814 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 KIF14Q15058 1648 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms