RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 SCRN1Q12765 414 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 LSG1Q9H089 658 aaKnown RBP16.48■□□□□ 0.23
PSME4-201ENST00000389993 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
PSME4-201ENST00000389993 BTDP43251 543 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 CBX8Q9HC52 389 aa16.48■□□□□ 0.23
PSME4-201ENST00000389993 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
PSME4-201ENST00000389993 KCNQ2O43526 872 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 ZNF202O95125 648 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 LARGE1O95461 756 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 PLEKHA4Q9H4M7 779 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 EIF3JO75822 258 aaKnown RBP16.47■□□□□ 0.23
PSME4-201ENST00000389993 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
PSME4-201ENST00000389993 CLTCQ00610 1675 aaKnown RBP16.47■□□□□ 0.23
PSME4-201ENST00000389993 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
PSME4-201ENST00000389993 UBXN2AP68543 259 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 FAM160A1Q05DH4 1040 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 CLIC4Q9Y696 253 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 SASH1O94885 1247 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 SNAP25P60880 206 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PSME4-201ENST00000389993 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 PAFAH1B1P43034 410 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 IFFO1Q0D2I5 559 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
PSME4-201ENST00000389993 ELP1O95163 1332 aa16.46■□□□□ 0.22
PSME4-201ENST00000389993 AOX1Q06278 1338 aa16.46■□□□□ 0.22
PSME4-201ENST00000389993 PDE8BO95263 885 aa16.46■□□□□ 0.22
PSME4-201ENST00000389993 NSMFQ6X4W1 530 aa16.46■□□□□ 0.22
PSME4-201ENST00000389993 SRRTQ9BXP5 876 aaKnown RBP16.46■□□□□ 0.22
PSME4-201ENST00000389993 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 ARID4AP29374 1257 aaPredicted RBP16.45■□□□□ 0.22
PSME4-201ENST00000389993 CETN1Q12798 172 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 PLCD4Q9BRC7 762 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 FAM107BQ9H098 131 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 IGSF3O75054 1194 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 PICK1Q9NRD5 415 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 TRAF5O00463 557 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 ALS2CR12Q96Q35 445 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
PSME4-201ENST00000389993 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 SYNCQ9H7C4 482 aa16.45■□□□□ 0.22
PSME4-201ENST00000389993 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 PTPROQ16827 1216 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 IQUBQ8NA54 791 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 USP28Q96RU2 1077 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.222e-11■■■■■ 27.4
PSME4-201ENST00000389993 TNKSO95271 1327 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
PSME4-201ENST00000389993 MTERF4Q7Z6M4 381 aaKnown RBP16.44■□□□□ 0.22
PSME4-201ENST00000389993 LCORLQ8N3X6 602 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
PSME4-201ENST00000389993 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 SERTAD1Q9UHV2 236 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
PSME4-201ENST00000389993 RHOXF2BP0C7M4 288 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 GPT2Q8TD30 523 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 RHOXF2Q9BQY4 288 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 SV2BQ7L1I2 683 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 CHGBP05060 677 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 CYP21A2P08686 494 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 PSMB7Q99436 277 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
PSME4-201ENST00000389993 ADCY9O60503 1353 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 KRT13P13646 458 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 TECP42680 631 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
PSME4-201ENST00000389993 MAATS1Q7Z4T9 603 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 OSBP2Q969R2 916 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 TAB2Q9NYJ8 693 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 SLC16A2P36021 539 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 GIGYF2Q6Y7W6 1299 aaKnown RBP16.43■□□□□ 0.22
PSME4-201ENST00000389993 STXBP4Q6ZWJ1 553 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 INF2Q27J81 1249 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
PSME4-201ENST00000389993 CACNB3P54284 484 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.225e-18■□□□□ 10.4
PSME4-201ENST00000389993 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 BMP15O95972 392 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
PSME4-201ENST00000389993 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms