RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 NAPAP54920 295 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
NUP58-202ENST00000381736 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
NUP58-202ENST00000381736 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 TMED8Q6PL24 325 aaPredicted RBP12.96□□□□□ -0.33
NUP58-202ENST00000381736 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
NUP58-202ENST00000381736 RPAP1Q9BWH6 1393 aaPredicted RBP12.96□□□□□ -0.33
NUP58-202ENST00000381736 SYCE3A1L190 88 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 UBE2HP62256 183 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 GRIPAP1Q4V328 841 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 VGLL2Q8N8G2 317 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
NUP58-202ENST00000381736 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
NUP58-202ENST00000381736 PES1O00541 588 aaKnown RBP12.96□□□□□ -0.34
NUP58-202ENST00000381736 DEXIO95424 95 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 DPEP1P16444 411 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 TM4SF1P30408 202 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 SCRN1Q12765 414 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 PPP2R5BQ15173 497 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 INCENPQ9NQS7 918 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.34
NUP58-202ENST00000381736 POLLQ9UGP5 575 aa12.96□□□□□ -0.34
NUP58-202ENST00000381736 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 LARGE1O95461 756 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 PKP1Q13835 747 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 CMTR1Q8N1G2 835 aaKnown RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 FANCBQ8NB91 859 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 MARF1Q9Y4F3 1742 aaKnown RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
NUP58-202ENST00000381736 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
NUP58-202ENST00000381736 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
NUP58-202ENST00000381736 CYP2D6P10635 497 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CRKP46108 304 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CUL4AQ13619 759 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 ALX1Q15699 326 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 GIMAP6Q6P9H5 292 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CUL5Q93034 780 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CLSTN1O94985 981 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CALML3P27482 149 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CACNB3P54284 484 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 TNFAIP1Q13829 316 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 KLHL40Q2TBA0 621 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
NUP58-202ENST00000381736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.94□□□□□ -0.34
NUP58-202ENST00000381736 BRD1O95696 1058 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
NUP58-202ENST00000381736 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 CSRNP1Q96S65 589 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
NUP58-202ENST00000381736 ZYXQ15942 572 aaKnown RBP12.93□□□□□ -0.34
NUP58-202ENST00000381736 CCDC183Q5T5S1 534 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 NF2P35240 595 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 SLC1A4P43007 532 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 CFAP100Q494V2 611 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 PROM2Q8N271 834 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 ARHGEF10LQ9HCE6 1279 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
NUP58-202ENST00000381736 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
NUP58-202ENST00000381736 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
NUP58-202ENST00000381736 KRT2P35908 639 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 STOX1Q6ZVD7 989 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 C6orf50Q9HD87 102 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 NEDD4P46934 1319 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 TOB2Q14106 344 aaPredicted RBP12.92□□□□□ -0.34
NUP58-202ENST00000381736 KRT40Q6A162 431 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 TTC14Q96N46 770 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 PRKG1Q13976 671 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
NUP58-202ENST00000381736 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
NUP58-202ENST00000381736 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms