RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 DEFB132Q7Z7B7 95 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 TMEM87AQ8NBN3 555 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 GPR101Q96P66 508 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 ZSCAN16Q9H4T2 348 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 ZSWIM5Q9P217 1185 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 ROBO3Q96MS0 1386 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 CPLX1O14810 134 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 DTNBO60941 627 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 FOXD4L6Q3SYB3 417 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 FOXD4L3Q6VB84 417 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 CHST3Q7LGC8 479 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 MRIQ9BWK5 157 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 TOMM22Q9NS69 142 aa16.14■□□□□ 0.17
TNFSF13-203ENST00000380535 CCDC196A0A1B0GTZ2 297 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 WTAPQ15007 396 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 FOCADQ5VW36 1801 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 ESPNB1AK53 854 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 USP17L21D6R901 530 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 ZBTB43O43298 467 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 GTF2IP78347 998 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 SLC12A7Q9Y666 1083 aa16.13■□□□□ 0.17
TNFSF13-203ENST00000380535 H3BQV1 296 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 C7orf43Q8WVR3 580 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 PPP1R9BQ96SB3 815 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
TNFSF13-203ENST00000380535 CALM1P0DP23 149 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 CALM2P0DP24 149 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 CALM3P0DP25 149 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 BTDP43251 543 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 STRIP1Q5VSL9 837 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 GDPD2Q9HCC8 539 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 MKRN1Q9UHC7 482 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 CCT2P78371 535 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 ATL3Q6DD88 541 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 HHIPL2Q6UWX4 724 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-203ENST00000380535 POLD1P28340 1107 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 TGFB2P61812 414 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 WASF1Q92558 559 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 SNED1Q8TER0 1413 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 STK36Q9NRP7 1315 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 JAK2O60674 1132 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 CHRNA5P30532 468 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 TMEM51Q9NW97 253 aa16.1■□□□□ 0.17
TNFSF13-203ENST00000380535 GOLGA8AA7E2F4 631 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 MAFGO15525 162 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 DIXDC1Q155Q3 683 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 CDC37L1Q7L3B6 337 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 SLC51AQ86UW1 340 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 PSME4Q14997 1843 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 GADD45BO75293 160 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 KRT85P78386 507 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
TNFSF13-203ENST00000380535 TEKT1Q969V4 418 aa16.08■□□□□ 0.16
TNFSF13-203ENST00000380535 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
TNFSF13-203ENST00000380535 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-203ENST00000380535 MYH1P12882 1939 aa16.08■□□□□ 0.16
TNFSF13-203ENST00000380535 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 DDAH1O94760 285 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 DNM1Q05193 864 aaKnown RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 SEC23AQ15436 765 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 SYAP1Q96A49 352 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 NCOA5Q9HCD5 579 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms