RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ATP5JP18859 108 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 RAB3IL1Q8TBN0 382 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 STK24Q9Y6E0 443 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 NDC80O14777 642 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 STX10O60499 249 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 KRT9P35527 623 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 MAST3O60307 1309 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 CALUO43852 315 aaPredicted RBP17.93■□□□□ 0.46
COL2A1-202ENST00000380518 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC14Q49A88 953 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 FAM169AQ9Y6X4 670 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 BRD1O95696 1058 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 TERF1P54274 439 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 POSTNQ15063 836 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 PHKBQ93100 1093 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CARD6Q9BX69 1037 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 GADD45BO75293 160 aaPredicted RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 KRT5P13647 590 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ASIC2Q16515 512 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 RIOK3O14730 519 aaKnown RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ATP5DP30049 168 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CEP128Q6ZU80 1094 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 ARHGEF10LQ9HCE6 1279 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 SECISBP2LQ93073 1101 aaKnown RBP17.92■□□□□ 0.46
COL2A1-202ENST00000380518 VTI1AQ96AJ9 217 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 PKD2L1Q9P0L9 805 aa17.92■□□□□ 0.46
COL2A1-202ENST00000380518 JAK2O60674 1132 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 SNX29Q8TEQ0 813 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MROH5Q6ZUA9 1318 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 SPATA5Q8NB90 893 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 WDR62O43379 1518 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZAP70P43403 619 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZBTB9Q96C00 473 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ZNF532Q9HCE3 1301 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 CHMP2AO43633 222 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 APBB1IPQ7Z5R6 666 aaPredicted RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 MAK16Q9BXY0 300 aaKnown RBP17.91■□□□□ 0.46
COL2A1-202ENST00000380518 STIM2Q9P246 746 aa17.91■□□□□ 0.46
COL2A1-202ENST00000380518 ARHGEF35A5YM69 484 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 MAGEA1P43355 309 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 ADCY7P51828 1080 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 AATFQ9NY61 560 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 E7EWF7 191 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 EIF6P56537 245 aaKnown RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC84Q86UT8 332 aaPredicted RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 AFAP1L1Q8TED9 768 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 EXOC7Q9UPT5 735 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC169A6NNP5 214 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TAF5LO75529 589 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 CTDSPL2Q05D32 466 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TRIM7Q9C029 511 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 TAB2Q9NYJ8 693 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 NDUFB9Q9Y6M9 179 aa17.9■□□□□ 0.46
COL2A1-202ENST00000380518 A6NNZ2 444 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 TUBB8Q3ZCM7 444 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IFT20Q8IY31 132 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IGSF3O75054 1194 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 MAP3K9P80192 1104 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 MAP7D1Q3KQU3 841 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 UBL4BQ8N7F7 174 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
COL2A1-202ENST00000380518 IFT74Q96LB3 600 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 SLC1A4P43007 532 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 ZNF365Q70YC5 407 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 TTC16Q8NEE8 873 aa17.89■□□□□ 0.45
COL2A1-202ENST00000380518 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 HARSP12081 509 aaKnown RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 TTC31Q49AM3 519 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 ABCC4O15439 1325 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 B4GALNT4Q76KP1 1039 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 KCNJ14Q9UNX9 436 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 POLD1P28340 1107 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
COL2A1-202ENST00000380518 DNM3Q9UQ16 869 aa17.88■□□□□ 0.45
COL2A1-202ENST00000380518 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms