RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TMTC2Q8N394 836 aa25.01■■□□□ 1.59
TRIM54-202ENST00000380075 ENGASEQ8NFI3 743 aa25.01■■□□□ 1.59
TRIM54-202ENST00000380075 ALG1Q9BT22 464 aa25.01■■□□□ 1.59
TRIM54-202ENST00000380075 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
TRIM54-202ENST00000380075 CACNA1SQ13698 1873 aa25.01■■□□□ 1.59
TRIM54-202ENST00000380075 CCDC69A6NI79 296 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 CTDSPL2Q05D32 466 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 STK38Q15208 465 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 MRPS27Q92552 414 aaKnown RBP25■■□□□ 1.59
TRIM54-202ENST00000380075 SNW1Q13573 536 aaKnown RBP25■■□□□ 1.59
TRIM54-202ENST00000380075 TMED8Q6PL24 325 aaPredicted RBP25■■□□□ 1.59
TRIM54-202ENST00000380075 RAB11FIP4Q86YS3 637 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 NAP1L5Q96NT1 182 aaPredicted RBP25■■□□□ 1.59
TRIM54-202ENST00000380075 CBX8Q9HC52 389 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 ANAPC4Q9UJX5 808 aa25■■□□□ 1.59
TRIM54-202ENST00000380075 ZBTB22O15209 634 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 OTUD7BQ6GQQ9 843 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 MICU3Q86XE3 530 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 VPS37DQ86XT2 251 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 FSIP1Q8NA03 581 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 WASF1Q92558 559 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 GOLPH3LQ9H4A5 285 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 PCDHA7Q9UN72 937 aa24.99■■□□□ 1.59
TRIM54-202ENST00000380075 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.99■■□□□ 1.59
TRIM54-202ENST00000380075 MAGEB6P1A0A0J9YX57 407 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 GOLGA6L6A8MZA4 724 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 PRKAB2O43741 272 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 IARSP41252 1262 aaKnown RBP24.98■■□□□ 1.59
TRIM54-202ENST00000380075 SF3A1Q15459 793 aaKnown RBP24.98■■□□□ 1.59
TRIM54-202ENST00000380075 NTRK3Q16288 839 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 TDRD7Q8NHU6 1098 aaKnown RBP24.98■■□□□ 1.59
TRIM54-202ENST00000380075 NKX2-3Q8TAU0 364 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 ANKRD2Q9GZV1 360 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 TMX4Q9H1E5 349 aaPredicted RBP24.98■■□□□ 1.59
TRIM54-202ENST00000380075 ERICH2A1L162 156 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 CDC27P30260 824 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 GYG1P46976 350 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 RAI14Q9P0K7 980 aa24.98■■□□□ 1.59
TRIM54-202ENST00000380075 SPTLC2O15270 562 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 KIAA2012Q0VF49 1180 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 TRIM29Q14134 588 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 SOGA3Q5TF21 947 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 ARHGAP27Q6ZUM4 889 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 ABCF2Q9UG63 623 aa24.97■■□□□ 1.59
TRIM54-202ENST00000380075 POLR3DP05423 398 aaPredicted RBP24.96■■□□□ 1.59
TRIM54-202ENST00000380075 ZNF165P49910 485 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 GPSM2P81274 684 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 PPARAQ07869 468 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 STX1AQ16623 288 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 CC2D2BQ6DHV5 1058 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 FBXO33Q7Z6M2 555 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 MIGA1Q8NAN2 632 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 COL1A1P02452 1464 aaPredicted RBP24.96■■□□□ 1.59
TRIM54-202ENST00000380075 IFNAR1P17181 557 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 PLCB2Q00722 1185 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 WTAPQ15007 396 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 ANO1Q5XXA6 986 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 FAM84BQ96KN1 310 aaPredicted RBP24.96■■□□□ 1.59
TRIM54-202ENST00000380075 SENP2Q9HC62 589 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 FAM217BQ9NTX9 383 aaPredicted RBP24.96■■□□□ 1.59
TRIM54-202ENST00000380075 CLIC4Q9Y696 253 aa24.96■■□□□ 1.59
TRIM54-202ENST00000380075 SNED1Q8TER0 1413 aa24.95■■□□□ 1.59
TRIM54-202ENST00000380075 CCDC196A0A1B0GTZ2 297 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 PCP11498 1178 aaKnown RBP24.95■■□□□ 1.58
TRIM54-202ENST00000380075 TERF1P54274 439 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 SSRP1Q08945 709 aaKnown RBP24.95■■□□□ 1.58
TRIM54-202ENST00000380075 KRT40Q6A162 431 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 LUZP1Q86V48 1076 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 RTKN2Q8IZC4 609 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 FMR1NBQ8N0W7 255 aaPredicted RBP24.95■■□□□ 1.58
TRIM54-202ENST00000380075 MPNDQ8N594 471 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 ANKIB1Q9P2G1 1089 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 TACC3Q9Y6A5 838 aa24.95■■□□□ 1.58
TRIM54-202ENST00000380075 WTIPA6NIX2 430 aaPredicted RBP24.94■■□□□ 1.58
TRIM54-202ENST00000380075 KIF28PB7ZC32 967 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 FMNL1O95466 1100 aaPredicted RBP24.94■■□□□ 1.58
TRIM54-202ENST00000380075 RIOK1Q9BRS2 568 aaKnown RBP24.94■■□□□ 1.58
TRIM54-202ENST00000380075 NFKBIEO00221 500 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 AP5Z1O43299 807 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 IGSF3O75054 1194 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 PPP2R5BQ15173 497 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 DPP8Q6V1X1 898 aaPredicted RBP24.94■■□□□ 1.58
TRIM54-202ENST00000380075 INCENPQ9NQS7 918 aa24.94■■□□□ 1.58
TRIM54-202ENST00000380075 ARFGEF1Q9Y6D6 1849 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 GRIN3BO60391 1043 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 ANO10Q9NW15 660 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 IQSEC3Q9UPP2 1182 aaPredicted RBP24.93■■□□□ 1.58
TRIM54-202ENST00000380075 RXRAP19793 462 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 U2AF2P26368 475 aaKnown RBP eCLIP24.93■■□□□ 1.58
TRIM54-202ENST00000380075 RRP12Q5JTH9 1297 aaKnown RBP24.93■■□□□ 1.58
TRIM54-202ENST00000380075 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.93■■□□□ 1.58
TRIM54-202ENST00000380075 ADGRA1Q86SQ6 560 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 JMYQ8N9B5 988 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 ESR2Q92731 530 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 DNAJC25Q9H1X3 360 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 TOMM22Q9NS69 142 aa24.93■■□□□ 1.58
TRIM54-202ENST00000380075 RANBP6O60518 1105 aaKnown RBP24.92■■□□□ 1.58
TRIM54-202ENST00000380075 RASSF7Q02833 373 aa24.92■■□□□ 1.58
TRIM54-202ENST00000380075 SLC39A14Q15043 492 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms