RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 IFNL3Q8IZI9 196 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 HOOK2Q96ED9 719 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 GNAT2P19087 354 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 FKBP1BP68106 108 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 DYNLL2Q96FJ2 89 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 CCDC171Q6TFL3 1326 aa14.03□□□□□ -0.16
DEPDC4-202ENST00000378244 RPAP1Q9BWH6 1393 aaPredicted RBP14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 FOXP2O15409 715 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 CTR9Q6PD62 1173 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 SLC44A5Q8NCS7 719 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 ZNF341Q9BYN7 854 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 NACAP1Q9BZK3 213 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 NAPBQ9H115 298 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 DNAJC18Q9H819 358 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 SERPINB13Q9UIV8 391 aa14.02□□□□□ -0.16
DEPDC4-202ENST00000378244 VGLL4Q14135 290 aa14.02□□□□□ -0.17
DEPDC4-202ENST00000378244 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
DEPDC4-202ENST00000378244 ELP3Q9H9T3 547 aa14.02□□□□□ -0.17
DEPDC4-202ENST00000378244 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 SLC10A4Q96EP9 437 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 CSADQ9Y600 493 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 TRPM7Q96QT4 1865 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 LDLRAD1Q5T700 205 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 CCDC84Q86UT8 332 aaPredicted RBP14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 FOXP4Q8IVH2 680 aaPredicted RBP14.01□□□□□ -0.17
DEPDC4-202ENST00000378244 RASSF10A6NK89 507 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 PHF20L1A8MW92 1017 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 GDF11O95390 407 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 FGAP02671 866 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 RRP1BQ14684 758 aaKnown RBP14□□□□□ -0.17
DEPDC4-202ENST00000378244 TICAM2Q86XR7 235 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 RUFY2Q8WXA3 655 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 CDK5RAP2Q96SN8 1893 aa14□□□□□ -0.17
DEPDC4-202ENST00000378244 VEGFBP49765 207 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 MFAP1P55081 439 aaKnown RBP13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 MAP3K11Q16584 847 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 CAPNS2Q96L46 248 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 ARPP21Q9UBL0 812 aaPredicted RBP13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 HERC5Q9UII4 1024 aaKnown RBP13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 BAZ2AQ9UIF9 1905 aaKnown RBP13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 HAND2P61296 217 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 ZIC5Q96T25 663 aa13.99□□□□□ -0.17
DEPDC4-202ENST00000378244 TBC1D12O60347 775 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 AOC2O75106 756 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 CDC45O75419 566 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 PRDM1O75626 825 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 MAP3K10Q02779 954 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 GIMAP6Q6P9H5 292 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 PAPPA2Q9BXP8 1791 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 COL2A1P02458 1487 aaPredicted RBP13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 SGSM2O43147 1006 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 JAG1P78504 1218 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 INCENPQ9NQS7 918 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 ZNF112Q9UJU3 913 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
DEPDC4-202ENST00000378244 MYH1P12882 1939 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 MPHOSPH10O00566 681 aaKnown RBP13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 PTH1RQ03431 593 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 CASC1Q6TDU7 716 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 OPTNQ96CV9 577 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 ESYT1Q9BSJ8 1104 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 EHD4Q9H223 541 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 CTNND1O60716 968 aaKnown RBP13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 SHMT1P34896 483 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 CAP2P40123 477 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 CDK8P49336 464 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 GABPAQ06546 454 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 PPARAQ07869 468 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 CERKLQ49MI3 558 aaPredicted RBP13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 RASAL3Q86YV0 1011 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 DNAJC5GQ8N7S2 189 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
DEPDC4-202ENST00000378244 FOCADQ5VW36 1801 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 SBK1Q52WX2 424 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
DEPDC4-202ENST00000378244 NAV1Q8NEY1 1877 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 FAM155AB1AL88 458 aaPredicted RBP13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 GH2P01242 217 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 RAB3GAP1Q15042 981 aa13.96□□□□□ -0.18
DEPDC4-202ENST00000378244 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms