RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZNF202O95125 648 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 VPS36Q86VN1 386 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 NIM1KQ8IY84 436 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 PNMA1Q8ND90 353 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 FLAD1Q8NFF5 587 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 ZSCAN10Q96SZ4 725 aaPredicted RBP20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 ELP1O95163 1332 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 ADD2P35612 726 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 PFKFB2O60825 505 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 LCORLQ8N3X6 602 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 ZNF408Q9H9D4 720 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 PIH1D3Q9NQM4 214 aaKnown RBP20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 PIK3C2BO00750 1634 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 XDHP47989 1333 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 ADCY9O60503 1353 aa20.36■□□□□ 0.85
PTPDC1-202ENST00000375360 FAM114A1Q8IWE2 563 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 KIF2AO00139 706 aaPredicted RBP20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 CHMP2AO43633 222 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 SPAG5Q96R06 1193 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 MED14O60244 1454 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 MCAMP43121 646 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 CETN1Q12798 172 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 SNW1Q13573 536 aaKnown RBP20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 BICD1Q96G01 975 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 CASQ1P31415 396 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 ARID5AQ03989 594 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 MTX1Q13505 466 aa20.35■□□□□ 0.85
PTPDC1-202ENST00000375360 STXBP4Q6ZWJ1 553 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 PAF1Q8N7H5 531 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 NF2P35240 595 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 USO1O60763 962 aaKnown RBP20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 LARGE1O95461 756 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 NOP2P46087 812 aaKnown RBP20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 HOMER2Q9NSB8 354 aa20.34■□□□□ 0.85
PTPDC1-202ENST00000375360 OVOS2A0A0J9YW53 1432 aa20.33■□□□□ 0.85
PTPDC1-202ENST00000375360 NCAPD2Q15021 1401 aa20.33■□□□□ 0.85
PTPDC1-202ENST00000375360 OVOS2Q6IE36 1432 aa20.33■□□□□ 0.85
PTPDC1-202ENST00000375360 MMP10P09238 476 aa20.33■□□□□ 0.85
PTPDC1-202ENST00000375360 MTERF4Q7Z6M4 381 aaKnown RBP20.33■□□□□ 0.85
PTPDC1-202ENST00000375360 ERCC3P19447 782 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 SPAG1Q07617 926 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 MAP7D2Q96T17 732 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 AGLP35573 1532 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 CFBP00751 764 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 NOLC1Q14978 699 aaKnown RBP eCLIP20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.84
PTPDC1-202ENST00000375360 FRMPD2Q68DX3 1309 aaPredicted RBP20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 TCHPQ9BT92 498 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CRB1P82279 1406 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CERS3Q8IU89 383 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 GPKOWQ92917 476 aaPredicted RBP eCLIP20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 RAD51AP2Q09MP3 1159 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 NONOQ15233 471 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CCDC150Q8NCX0 1101 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 CLSTN2Q9H4D0 955 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 MYO6Q9UM54 1294 aa20.32■□□□□ 0.84
PTPDC1-202ENST00000375360 KLRF2D3W0D1 207 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 CDR1P51861 262 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 PPP2R5BQ15173 497 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 APOA5Q6Q788 366 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 MACROD2A1Z1Q3 448 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 PPEF1O14829 653 aaPredicted RBP20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 CCT6AP40227 531 aaKnown RBP20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 MYL5Q02045 173 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 ZNF772Q68DY9 489 aaPredicted RBP20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 ZKSCAN5Q9Y2L8 839 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 ERLIN1O75477 346 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 NSMFQ6X4W1 530 aa20.31■□□□□ 0.84
PTPDC1-202ENST00000375360 BACH1O14867 736 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 BBOX1O75936 387 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 PICK1Q9NRD5 415 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 CUTAO60888 179 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 TAF3Q5VWG9 929 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 CTAGE1Q96RT6 745 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 CLRN2A0PK11 232 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 SMCO2A6NFE2 343 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 TMCO5BA8MYB1 307 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 NR1I2O75469 434 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 PDCL2Q8N4E4 241 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 PUF60Q9UHX1 559 aaKnown RBP20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 FBXO18Q8NFZ0 1043 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 DNAI1Q9UI46 699 aa20.3■□□□□ 0.84
PTPDC1-202ENST00000375360 DRC1Q96MC2 740 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms