RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 VGLL2Q8N8G2 317 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 ESR2Q92731 530 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-203ENST00000374429 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-203ENST00000374429 CATIPQ7Z7H3 387 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 KCNB2Q92953 911 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 VWA3AA6NCI4 1184 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 ATP1A3P13637 1013 aa12.45□□□□□ -0.42
CXCL12-203ENST00000374429 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
CXCL12-203ENST00000374429 CDKL5O76039 1030 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 TFAP4Q01664 338 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-203ENST00000374429 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 LY9Q9HBG7 655 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 C5P01031 1676 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 GTF2IP78347 998 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 PIK3AP1Q6ZUJ8 805 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 LINC00301Q8NCQ3 95 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
CXCL12-203ENST00000374429 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 CTCFLQ8NI51 663 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-203ENST00000374429 BLZF1Q9H2G9 400 aa12.44□□□□□ -0.42
CXCL12-203ENST00000374429 ZNF804BA4D1E1 1349 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
CXCL12-203ENST00000374429 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
CXCL12-203ENST00000374429 CCDC144BQ3MJ40 725 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 UBA5Q9GZZ9 404 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 HSPA1LP34931 641 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 CBX1P83916 185 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-203ENST00000374429 MTERF4Q7Z6M4 381 aaKnown RBP12.43□□□□□ -0.42
CXCL12-203ENST00000374429 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-203ENST00000374429 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 KRT23Q9C075 422 aa12.43□□□□□ -0.42
CXCL12-203ENST00000374429 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-203ENST00000374429 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 STX1AQ16623 288 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
CXCL12-203ENST00000374429 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-203ENST00000374429 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
CXCL12-203ENST00000374429 MARCH6O60337 910 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 UTP14CQ5TAP6 766 aaKnown RBP12.41□□□□□ -0.42
CXCL12-203ENST00000374429 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
CXCL12-203ENST00000374429 RCOR1Q9UKL0 485 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 LRRC37A3O60309 1634 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 ENAHQ8N8S7 591 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-203ENST00000374429 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
CXCL12-203ENST00000374429 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 LRRC4BQ9NT99 713 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 SERTAD1Q9UHV2 236 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 IGSF3O75054 1194 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 SKILP12757 684 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 MFSD14BQ5SR56 506 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 KAT14Q9H8E8 782 aa12.41□□□□□ -0.42
CXCL12-203ENST00000374429 DCCP43146 1447 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 ZMYM6O95789 1325 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 AFF2P51816 1311 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 FRMPD2Q68DX3 1309 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-203ENST00000374429 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 FGFR2P21802 821 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 EARS2Q5JPH6 523 aaKnown RBP12.4□□□□□ -0.42
CXCL12-203ENST00000374429 KCNG4Q8TDN1 519 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-203ENST00000374429 KCNH3Q9ULD8 1083 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 CACNA1FO60840 1977 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-203ENST00000374429 ZNF75DP51815 510 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 TMEM87AQ8NBN3 555 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 ZSCAN10Q96SZ4 725 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-203ENST00000374429 KCNF1Q9H3M0 494 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 DBNDD1Q9H9R9 158 aa12.4□□□□□ -0.42
CXCL12-203ENST00000374429 OFD1O75665 1012 aa12.4□□□□□ -0.43
CXCL12-203ENST00000374429 SNW1Q13573 536 aaKnown RBP12.4□□□□□ -0.43
CXCL12-203ENST00000374429 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.43
CXCL12-203ENST00000374429 NAT10Q9H0A0 1025 aaKnown RBP12.4□□□□□ -0.43
CXCL12-203ENST00000374429 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
CXCL12-203ENST00000374429 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
CXCL12-203ENST00000374429 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms