RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ZNF215Q9UL58 517 aaPredicted RBP20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 KIF5BP33176 963 aa20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 TRIM47Q96LD4 638 aa20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GOLGA8HP0CJ92 632 aa20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
TRAF3IP1-201ENST00000373327 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 SLU7O95391 586 aaKnown RBP20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ERFEQ4G0M1 354 aa20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 RILPL1Q5EBL4 403 aa20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 ZFP91Q96JP5 570 aaPredicted RBP20.14■□□□□ 0.82
TRAF3IP1-201ENST00000373327 RASGRP4Q8TDF6 673 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KCNF1Q9H3M0 494 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SRP68Q9UHB9 627 aaKnown RBP20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 FAM170AA1A519 330 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 POSTNQ15063 836 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 UBE3CQ15386 1083 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 USPL1Q5W0Q7 1092 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 DRC1Q96MC2 740 aa20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KDM6AO15550 1401 aaPredicted RBP20.14■□□□□ 0.81
TRAF3IP1-201ENST00000373327 LMTK3Q96Q04 1460 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KIF5CO60282 957 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 MTIF2P46199 727 aaKnown RBP20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 NAPAP54920 295 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 USP27XA6NNY8 438 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 PARP10Q53GL7 1025 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CTNND2Q9UQB3 1225 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KIF2AO00139 706 aaPredicted RBP20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 BAG3O95817 575 aa20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 LDHBP07195 334 aaKnown RBP20.13■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CUTAO60888 179 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CMA1P23946 247 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 LETM2Q2VYF4 491 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CRACR2BQ8N4Y2 399 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 PXDNLA1KZ92 1463 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 FOXN1O15353 648 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 RPS8P62241 208 aaKnown RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TFAP4Q01664 338 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SLC39A14Q15043 492 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 PPP1R1BQ9UD71 204 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 PCDHB6Q9Y5E3 794 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 GPS2Q13227 327 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 HSP90B2PQ58FF3 399 aa20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CCDC94Q9BW85 323 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-201ENST00000373327 GUCY1A2P33402 732 aa20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 EXOSC10Q01780 885 aaKnown RBP20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TGFBRAP1Q8WUH2 860 aa20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 MB21D2Q8IYB1 491 aaPredicted RBP20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 BAG1Q99933 345 aaPredicted RBP20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 UTYO14607 1347 aa20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 PEAK1Q9H792 1746 aa20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 FDPSP14324 419 aaKnown RBP20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TCP11L1Q9NUJ3 509 aa20.11■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CYP19A1P11511 503 aaPredicted RBP20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CARD6Q9BX69 1037 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 NMT2O60551 498 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TTC38Q5R3I4 469 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SMARCC1Q92922 1105 aaPredicted RBP20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CCDC102AQ96A19 550 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TNS3Q68CZ2 1445 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 ERCC6LQ2NKX8 1250 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KANK3Q6NY19 840 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 OXER1Q8TDS5 423 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
TRAF3IP1-201ENST00000373327 ASIC1P78348 528 aa20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 ANTXR2P58335 489 aa20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 KRBA2Q6ZNG9 492 aa20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CSRNP2Q9H175 543 aa20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TCHHQ07283 1943 aa20.09■□□□□ 0.81
TRAF3IP1-201ENST00000373327 IGSF22Q8N9C0 903 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 CPVLQ9H3G5 476 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TAB2Q9NYJ8 693 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 RTL9Q8NET4 1388 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 WDHD1O75717 1129 aaPredicted RBP20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 JAKMIP3Q5VZ66 844 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 EPSTI1Q96J88 318 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 POLR3EQ9NVU0 708 aa20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
TRAF3IP1-201ENST00000373327 TRIM21P19474 475 aaKnown RBP20.08■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CYP2D6P10635 497 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms