RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 RABEP1Q15276 862 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 FAM83AQ86UY5 434 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 ZNF784Q8NCA9 323 aaPredicted RBP24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 DDTLA6NHG4 134 aaPredicted RBP24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 SLURP2P0DP57 97 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 KRT32Q14532 448 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 AKNAD1Q5T1N1 836 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 TCEANC2Q96MN5 208 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 NEK1Q96PY6 1258 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 ZSWIM6Q9HCJ5 1215 aa24.54■■□□□ 1.52
TSC22D3-205ENST00000372390 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 POTEIP0CG38 1075 aa24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 POTEJP0CG39 1038 aa24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 STAG1Q8WVM7 1258 aa24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 TM6SF1Q9BZW5 370 aa24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 PPP2R3BQ9Y5P8 575 aa24.53■■□□□ 1.52
TSC22D3-205ENST00000372390 PRDM1O75626 825 aa24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 NEK4P51957 841 aa24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 KRT26Q7Z3Y9 468 aa24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 SLC44A5Q8NCS7 719 aa24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 POLR2AP24928 1970 aaKnown RBP24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 COL2A1P02458 1487 aaPredicted RBP24.52■■□□□ 1.52
TSC22D3-205ENST00000372390 CDAN1Q8IWY9 1227 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 AMOTL1Q8IY63 956 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 FAM151AQ8WW52 585 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 DEFB129Q9H1M3 183 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 ROBO3Q96MS0 1386 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 B4E1Z4 1266 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 KIF3CO14782 793 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 RASA3Q14644 834 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 RRP12Q5JTH9 1297 aaKnown RBP24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 MFSD6Q6ZSS7 791 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 RUFY3Q7L099 469 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 CHST3Q7LGC8 479 aa24.51■■□□□ 1.51
TSC22D3-205ENST00000372390 PSMA5P28066 241 aa24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 BLOC1S2Q6QNY1 142 aa24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 CDC37L1Q7L3B6 337 aa24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 ZSCAN29Q8IWY8 852 aaPredicted RBP24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 MB21D2Q8IYB1 491 aaPredicted RBP24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 TMEM39BQ9GZU3 492 aa24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 TOMM22Q9NS69 142 aa24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.5■■□□□ 1.51
TSC22D3-205ENST00000372390 RPS6KB1P23443 525 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 NCOA7Q8NI08 942 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 CYP46A1Q9Y6A2 500 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 ATRNL1Q5VV63 1379 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 MAP1SQ66K74 1059 aaPredicted RBP24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 CHADLQ6NUI6 762 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 CYB5R4Q7L1T6 521 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 TTC14Q96N46 770 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 LRRC2Q9BYS8 371 aa24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 DHX36Q9H2U1 1008 aaKnown RBP24.49■■□□□ 1.51
TSC22D3-205ENST00000372390 FGRP09769 529 aa24.48■■□□□ 1.51
TSC22D3-205ENST00000372390 ANP32AP39687 249 aaKnown RBP24.48■■□□□ 1.51
TSC22D3-205ENST00000372390 ANTXR2P58335 489 aa24.48■■□□□ 1.51
TSC22D3-205ENST00000372390 RALYLQ86SE5 291 aaKnown RBP24.48■■□□□ 1.51
TSC22D3-205ENST00000372390 TTC6Q86TZ1 520 aa24.48■■□□□ 1.51
TSC22D3-205ENST00000372390 MYH8P13535 1937 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 FAM196BA6NMK8 535 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 ADM5C9JUS6 153 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 HLA-DOAP06340 250 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 RNF41Q9H4P4 317 aaPredicted RBP24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 KDM4AO75164 1064 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 GABPAQ06546 454 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 TRDNQ13061 729 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 C16orf86Q6ZW13 317 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 GLIS2Q9BZE0 524 aaPredicted RBP24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 PDRG1Q9NUG6 133 aa24.47■■□□□ 1.51
TSC22D3-205ENST00000372390 SLC3A2P08195 630 aaKnown RBP24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 CDK8P49336 464 aa24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 EXOSC10Q01780 885 aaKnown RBP24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 DHX32Q7L7V1 743 aaKnown RBP24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 USP48Q86UV5 1035 aa24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 CSRNP1Q96S65 589 aa24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 LARP6Q9BRS8 491 aaKnown RBP24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 DNAJC18Q9H819 358 aa24.46■■□□□ 1.51
TSC22D3-205ENST00000372390 ORC4O43929 436 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 NOL8Q76FK4 1167 aaKnown RBP24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 HOOK2Q96ED9 719 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 CNNM2Q9H8M5 875 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 GPHNQ9NQX3 736 aaPredicted RBP24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 ZSWIM5Q9P217 1185 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 PRC1O43663 620 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 AK2P54819 239 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 PDE4BQ07343 736 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 FAM47AQ5JRC9 791 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 KRT23Q9C075 422 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 SERPINB13Q9UIV8 391 aa24.45■■□□□ 1.5
TSC22D3-205ENST00000372390 RANBP6O60518 1105 aaKnown RBP24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 TOMM70O94826 608 aa24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 HMGB1P09429 215 aaKnown RBP24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 SMC1BQ8NDV3 1235 aa24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 TEPSINQ96N21 525 aa24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 PI4KBQ9UBF8 816 aa24.44■■□□□ 1.5
TSC22D3-205ENST00000372390 RASA1P20936 1047 aa24.43■■□□□ 1.5
TSC22D3-205ENST00000372390 MCM5P33992 734 aa24.43■■□□□ 1.5
TSC22D3-205ENST00000372390 SUPT20HL1Q3ZLR7 823 aa24.43■■□□□ 1.5
TSC22D3-205ENST00000372390 RBM46Q8TBY0 533 aaKnown RBP24.43■■□□□ 1.5
TSC22D3-205ENST00000372390 ZKSCAN3Q9BRR0 538 aa24.43■■□□□ 1.5
TSC22D3-205ENST00000372390 EHD4Q9H223 541 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms