RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
COL4A6-202ENST00000372216 ADCY7P51828 1080 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 PDCL2Q8N4E4 241 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 IL17REQ8NFR9 667 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 KBTBD3Q8NAB2 608 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 TEKT1Q969V4 418 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 ERCC3P19447 782 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 NEK11Q8NG66 645 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 INSRP06213 1382 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 IRX3P78415 501 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-202ENST00000372216 RAPGEF1Q13905 1077 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 MAP7D1Q3KQU3 841 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 FAM47AQ5JRC9 791 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 IQUBQ8NA54 791 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 ANGEL1Q9UNK9 670 aaKnown RBP10.99□□□□□ -0.65
COL4A6-202ENST00000372216 FAM169AQ9Y6X4 670 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 TCP10L2B9ZVM9 353 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 GNG11P61952 73 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 ZBTB38Q8NAP3 1195 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-202ENST00000372216 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 MYL10Q9BUA6 226 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 DAPK3O43293 454 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 SIK1P57059 783 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
COL4A6-202ENST00000372216 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 FRMD4BQ9Y2L6 1034 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
COL4A6-202ENST00000372216 BIRC3Q13489 604 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 TTC30AQ86WT1 665 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 PLVAPQ9BX97 442 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 AGTPBP1Q9UPW5 1226 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 KIF1BO60333 1816 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 SPATA24Q86W54 205 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
COL4A6-202ENST00000372216 NCOA5Q9HCD5 579 aaKnown RBP10.98□□□□□ -0.65
COL4A6-202ENST00000372216 CTNND2Q9UQB3 1225 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 GYG1P46976 350 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 TXKP42681 527 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 SCNN1DP51172 638 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 PLCD1P51178 756 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-202ENST00000372216 CSADQ9Y600 493 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 KIF4AO95239 1232 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 IPO4Q8TEX9 1081 aaKnown RBP10.98□□□□□ -0.65
COL4A6-202ENST00000372216 AS3MTQ9HBK9 375 aa10.98□□□□□ -0.65
COL4A6-202ENST00000372216 MAP3K15Q6ZN16 1313 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 SMTNP53814 917 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 CCT6BQ92526 530 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 KRT19P08727 400 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 PPARAQ07869 468 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 FAM182BQ5T319 152 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 C4orf50Q6ZRC1 276 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 FAM196AQ6ZSG2 479 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 IFT74Q96LB3 600 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 EPB41P11171 864 aaKnown RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 TFAP4Q01664 338 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 STRN3Q13033 797 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 FBF1Q8TES7 1133 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 TXNDC16Q9P2K2 825 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 ELP1O95163 1332 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 RPL13P26373 211 aaKnown RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 GPATCH11Q8N954 259 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 SELENOOQ9BVL4 669 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 STK25O00506 426 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 BCAMP50895 628 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 KRT27Q7Z3Y8 459 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 ZNF830Q96NB3 372 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-202ENST00000372216 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
COL4A6-202ENST00000372216 HSF2BPO75031 334 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 CFBP00751 764 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 SYT1P21579 422 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 PRPHP41219 470 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 TYRO3Q06418 890 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 CHRNDQ07001 517 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 TNFAIP1Q13829 316 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 CCDC6Q16204 474 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 PPP1R12AO14974 1030 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-202ENST00000372216 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
COL4A6-202ENST00000372216 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms