RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 DAAM1Q9Y4D1 1078 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 NUCB1Q02818 461 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 VWA3BQ502W6 1294 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 PHBP35232 272 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 SLC4A7Q9Y6M7 1214 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 SSH1Q8WYL5 1049 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 CCDC124Q96CT7 223 aaKnown RBP16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 RPGRIP1Q96KN7 1286 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 HOMER3Q9NSC5 361 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 ST13P4Q8IZP2 240 aaPredicted RBP16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 SYCE1Q8N0S2 351 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 POLR3CQ9BUI4 534 aaPredicted RBP16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 ARHGAP5Q13017 1502 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 KDM1AO60341 852 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 ALDH1L2Q3SY69 923 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 TMTC4Q5T4D3 741 aa16.94■□□□□ 0.3
GTF3C4-201ENST00000372146 GNAT3A8MTJ3 354 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 STX10O60499 249 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 SLC12A2P55011 1212 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 VPS16Q9H269 839 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 SPC25Q9HBM1 224 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 SUN1O94901 812 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 KIF22Q14807 665 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 TSC1Q92574 1164 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 GSTA1P08263 222 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 GSTA2P09210 222 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 SLF2Q8IX21 1173 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 SAAL1Q96ER3 474 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 ESYT2A0FGR8 921 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 ZNF75DP51815 510 aa16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
GTF3C4-201ENST00000372146 KIF1CO43896 1103 aaKnown RBP16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 SKIP12755 728 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 ZNF711Q9Y462 761 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 TTLL3Q9Y4R7 772 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 LIN9Q5TKA1 542 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 PAWRQ96IZ0 340 aaKnown RBP16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 HP1BP3Q5SSJ5 553 aaPredicted RBP16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 SART1O43290 800 aaKnown RBP16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 ARHGAP44Q17R89 818 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 KRT80Q6KB66 452 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 CCDC197Q8NCU1 140 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 GNGT2O14610 69 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 MAD1L1Q9Y6D9 718 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 MCF2P10911 925 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 TEKT1Q969V4 418 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 PLIN2Q99541 437 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 KRT23Q9C075 422 aa16.92■□□□□ 0.3
GTF3C4-201ENST00000372146 A0A1B0GVL5 298 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 E9PMD0 336 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 PLS1Q14651 629 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 PEX26Q7Z412 305 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 HELLSQ9NRZ9 838 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 MAP7D3Q8IWC1 876 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 BRF1Q92994 677 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 MYD88Q99836 296 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 TRIM75PA6NK02 468 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 THAP12O43422 761 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 NAPAP54920 295 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 DYDC2Q96IM9 177 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 DAB2P98082 770 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 SH3GL3Q99963 347 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 TNFAIP3P21580 790 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 KRT14P02533 472 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 TMEM259Q4ZIN3 620 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
GTF3C4-201ENST00000372146 KCTD16Q68DU8 428 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 PALM2Q8IXS6 379 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 SNX21Q969T3 373 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 UBE3BQ7Z3V4 1068 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 PDHA1P08559 390 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 DDIT3P35638 169 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 RNF34Q969K3 372 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 TRIM27P14373 513 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 IFIH1Q9BYX4 1025 aaKnown RBP16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 TRMT10CQ7L0Y3 403 aaKnown RBP16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 KRT82Q9NSB4 513 aa16.9■□□□□ 0.3
GTF3C4-201ENST00000372146 IFT122Q9HBG6 1241 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms