RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
CHD1L-203ENST00000369259 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
CHD1L-203ENST00000369259 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
CHD1L-203ENST00000369259 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
CHD1L-203ENST00000369259 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 GOLGA6CA6NDK9 693 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 GOLIM4O00461 696 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 PRC1O43663 620 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 GOLGA6DP0CG33 693 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 ERCC5P28715 1186 aaPredicted RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 RFX5P48382 616 aaPredicted RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 AIMP1Q12904 312 aaKnown RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 RAB11FIP4Q86YS3 637 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 BCAS4Q8TDM0 211 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 PAG1Q9NWQ8 432 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 GOLGA6AQ9NYA3 693 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 CASP14P31944 242 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 PLCD1P51178 756 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 NLRP6P59044 892 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 TMTC1Q8IUR5 882 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 ALG1Q9BT22 464 aa18.34■□□□□ 0.53
CHD1L-203ENST00000369259 A1CFQ9NQ94 594 aaKnown RBP18.34■□□□□ 0.53
CHD1L-203ENST00000369259 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.53
CHD1L-203ENST00000369259 AGPSO00116 658 aa18.33■□□□□ 0.53
CHD1L-203ENST00000369259 EP400NLQ6ZTU2 488 aa18.33■□□□□ 0.53
CHD1L-203ENST00000369259 TICAM2Q86XR7 235 aa18.33■□□□□ 0.53
CHD1L-203ENST00000369259 CAPS2Q9BXY5 557 aa18.33■□□□□ 0.53
CHD1L-203ENST00000369259 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.33■□□□□ 0.53
CHD1L-203ENST00000369259 MAST3O60307 1309 aa18.33■□□□□ 0.52
CHD1L-203ENST00000369259 KRT40Q6A162 431 aa18.33■□□□□ 0.52
CHD1L-203ENST00000369259 KRI1Q8N9T8 703 aaKnown RBP18.33■□□□□ 0.52
CHD1L-203ENST00000369259 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
CHD1L-203ENST00000369259 RICTORQ6R327 1708 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 EIF3HO15372 352 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■■□ 23.8
CHD1L-203ENST00000369259 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 TACO1Q9BSH4 297 aaKnown RBP18.32■□□□□ 0.52
CHD1L-203ENST00000369259 ADD3Q9UEY8 706 aaKnown RBP18.32■□□□□ 0.52
CHD1L-203ENST00000369259 GCKRQ14397 625 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 CABS1Q96KC9 395 aa18.32■□□□□ 0.52
CHD1L-203ENST00000369259 GYPCP04921 128 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHD1L-203ENST00000369259 ERVK-24P63145 666 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 STAG1Q8WVM7 1258 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 GDAP1L1Q96MZ0 367 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 CTAGE1Q96RT6 745 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 SERTAD1Q9UHV2 236 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
CHD1L-203ENST00000369259 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
CHD1L-203ENST00000369259 DDR1Q08345 913 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 FILIP1LQ4L180 1135 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
CHD1L-203ENST00000369259 SELENOOQ9BVL4 669 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 EHD4Q9H223 541 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHD1L-203ENST00000369259 CAPN7Q9Y6W3 813 aa18.31■□□□□ 0.52
CHD1L-203ENST00000369259 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 GOLGA6BA6NDN3 693 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
CHD1L-203ENST00000369259 GNGT1P63211 74 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 MMS19Q96T76 1030 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 KDM6AO15550 1401 aaPredicted RBP18.3■□□□□ 0.52
CHD1L-203ENST00000369259 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 ATXN2Q99700 1313 aaKnown RBP18.3■□□□□ 0.52
CHD1L-203ENST00000369259 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
CHD1L-203ENST00000369259 AKAP4Q5JQC9 854 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 CYP26C1Q6V0L0 522 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 RPGRIP1Q96KN7 1286 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
CHD1L-203ENST00000369259 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
CHD1L-203ENST00000369259 ZMYM6O95789 1325 aa18.29■□□□□ 0.52
CHD1L-203ENST00000369259 ITIH6Q6UXX5 1313 aa18.29■□□□□ 0.52
CHD1L-203ENST00000369259 ANTXR2P58335 489 aa18.29■□□□□ 0.52
CHD1L-203ENST00000369259 HAND2P61296 217 aa18.29■□□□□ 0.52
CHD1L-203ENST00000369259 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
CHD1L-203ENST00000369259 CCNI2Q6ZMN8 369 aaPredicted RBP18.29■□□□□ 0.52
CHD1L-203ENST00000369259 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
CHD1L-203ENST00000369259 M0R2C6 588 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 PSMD14O00487 310 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 GPTP24298 496 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 FNTAP49354 379 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 TRDNQ13061 729 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 GRAMD1CQ8IYS0 662 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 C21orf2O43822 256 aa18.28■□□□□ 0.52
CHD1L-203ENST00000369259 CDKAL1Q5VV42 579 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms