RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 CRY2Q49AN0 593 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 PSMD14O00487 310 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 FRMPD2Q68DX3 1309 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 CDKL5O76039 1030 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 XBP1P17861 261 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 MARCKSP29966 332 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
SEMA6C-204ENST00000368914 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 NLRP5P59047 1200 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 ZNF654Q8IZM8 581 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 GSE1Q14687 1217 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 GTF3C6Q969F1 213 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
SEMA6C-204ENST00000368914 SLC16A10Q8TF71 515 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 TTC14Q96N46 770 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 TAF1P21675 1872 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 APOA5Q6Q788 366 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 BTAF1O14981 1849 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 MROH7-TTC4A0A0A0MT08 1334 aa16.54■□□□□ 0.24
SEMA6C-204ENST00000368914 TCRBV5S4A2TA0A5A2 114 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 ARPP21Q9UBL0 812 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 F13A1P00488 732 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
SEMA6C-204ENST00000368914 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 PDILTQ8N807 584 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
SEMA6C-204ENST00000368914 GOLGA6L3A6NEY3 463 aa16.52■□□□□ 0.23
SEMA6C-204ENST00000368914 CDK8P49336 464 aa16.52■□□□□ 0.23
SEMA6C-204ENST00000368914 SLC16A2P36021 539 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 ANTXR2P58335 489 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 SEC63Q9UGP8 760 aaKnown RBP16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 SYCE3A1L190 88 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 SNAP25P60880 206 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 NUP98P52948 1817 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 H7C1D1 291 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 CDC42EP5Q6NZY7 148 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 CKAP2LQ8IYA6 745 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA6C-204ENST00000368914 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 ISM2Q6H9L7 571 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 TMTC2Q8N394 836 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 ZNF384Q8TF68 577 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 INTS4Q96HW7 963 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 PTMAP06454 111 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 CXCL9Q07325 125 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 CERKLQ49MI3 558 aaPredicted RBP16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 CCDC73Q6ZRK6 1079 aa16.5■□□□□ 0.23
SEMA6C-204ENST00000368914 CDC27P30260 824 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 PLEKHA8P1O95397 391 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 KIF5BP33176 963 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 DHX8Q14562 1220 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 KCTD1Q719H9 257 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 ENAHQ8N8S7 591 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
SEMA6C-204ENST00000368914 NRAPQ86VF7 1730 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms