RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 ALDH8A1Q9H2A2 487 aaPredicted RBP18.76■□□□□ 0.59
LMNA-203ENST00000368297 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
LMNA-203ENST00000368297 PRDM1O75626 825 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 ESR2Q92731 530 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 LIMCH1Q9UPQ0 1083 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 ROBO3Q96MS0 1386 aa18.75■□□□□ 0.59
LMNA-203ENST00000368297 WDR19Q8NEZ3 1342 aa18.74■□□□□ 0.59
LMNA-203ENST00000368297 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
LMNA-203ENST00000368297 HLA-DOAP06340 250 aa18.74■□□□□ 0.59
LMNA-203ENST00000368297 SPDYE2Q495Y8 402 aa18.74■□□□□ 0.59
LMNA-203ENST00000368297 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
LMNA-203ENST00000368297 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
LMNA-203ENST00000368297 ZBED3Q96IU2 234 aaPredicted RBP18.74■□□□□ 0.59
LMNA-203ENST00000368297 CIZ1Q9ULV3 898 aaPredicted RBP18.74■□□□□ 0.59
LMNA-203ENST00000368297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
LMNA-203ENST00000368297 TCP10L2B9ZVM9 353 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 WNT10BO00744 389 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 ORC4O43929 436 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 ENTPD3O75355 529 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
LMNA-203ENST00000368297 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
LMNA-203ENST00000368297 ANTXR2P58335 489 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 TOB2Q14106 344 aaPredicted RBP18.73■□□□□ 0.59
LMNA-203ENST00000368297 NBPF9Q3BBW0 867 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 SAMD7Q7Z3H4 446 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 ZFPM1Q8IX07 1006 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 BRF1Q92994 677 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 TMX3Q96JJ7 454 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 ZNF287Q9HBT7 754 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 ZSWIM5Q9P217 1185 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 FGRP09769 529 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
LMNA-203ENST00000368297 DHX36Q9H2U1 1008 aaKnown RBP18.73■□□□□ 0.59
LMNA-203ENST00000368297 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
LMNA-203ENST00000368297 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
LMNA-203ENST00000368297 ZSCAN31Q96LW9 406 aaPredicted RBP18.72■□□□□ 0.59
LMNA-203ENST00000368297 EGFRP00533 1210 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 CDK8P49336 464 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
LMNA-203ENST00000368297 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 C16orf86Q6ZW13 317 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 SLC44A5Q8NCS7 719 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 TMEM87BQ96K49 555 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
LMNA-203ENST00000368297 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
LMNA-203ENST00000368297 ERICH2A1L162 156 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 IFIT3O14879 490 aaKnown RBP18.7■□□□□ 0.58
LMNA-203ENST00000368297 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
LMNA-203ENST00000368297 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
LMNA-203ENST00000368297 ZKSCAN3Q9BRR0 538 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 TRIM34Q9BYJ4 488 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 GPHNQ9NQX3 736 aaPredicted RBP18.7■□□□□ 0.58
LMNA-203ENST00000368297 SERPINB13Q9UIV8 391 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 TPCN1Q9ULQ1 816 aa18.7■□□□□ 0.58
LMNA-203ENST00000368297 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 SH2B1Q9NRF2 756 aaPredicted RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 ANGEL1Q9UNK9 670 aaKnown RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 LARGE1O95461 756 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 EPS15P42566 896 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 TNNI2P48788 182 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 IQCA1Q86XH1 822 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 PI4KBQ9UBF8 816 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 SWAP70Q9UH65 585 aa18.69■□□□□ 0.58
LMNA-203ENST00000368297 COL2A1P02458 1487 aaPredicted RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 ZC3H4Q9UPT8 1303 aaKnown RBP18.69■□□□□ 0.58
LMNA-203ENST00000368297 MYH8P13535 1937 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 RASA1P20936 1047 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 DDIT3P35638 169 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 NT5C2P49902 561 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 TFAP4Q01664 338 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 STK3Q13188 491 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 ME3Q16798 604 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 NFXL1Q6ZNB6 911 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 FBXL16Q8N461 479 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 EHD4Q9H223 541 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 CNTNAP1P78357 1384 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
LMNA-203ENST00000368297 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 WTAPQ15007 396 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
LMNA-203ENST00000368297 TRPM4Q8TD43 1214 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms