RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PDE8BO95263 885 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 NONOQ15233 471 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTPRK-205ENST00000368213 VPS72Q15906 364 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 ERLIN1O75477 346 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 AP5M1Q9H0R1 490 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-205ENST00000368213 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 KRT25Q7Z3Z0 450 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 NLRP10Q86W26 655 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 SORBS3O60504 671 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 TRPC3Q13507 836 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 ATP5JP18859 108 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 RPL13P26373 211 aaKnown RBP12.13□□□□□ -0.47
PTPRK-205ENST00000368213 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
PTPRK-205ENST00000368213 SLC27A2O14975 620 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 NR1I2O75469 434 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-205ENST00000368213 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
PTPRK-205ENST00000368213 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 UIMC1Q96RL1 719 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 GTPBP4Q9BZE4 634 aaKnown RBP12.12□□□□□ -0.47
PTPRK-205ENST00000368213 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 CCPG1Q9ULG6 757 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-205ENST00000368213 AKR1B10O60218 316 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 UBE2HP62256 183 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 NACA2Q9H009 215 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 TMEM232C9JQI7 657 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 ZEB2O60315 1214 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 PDE6AP16499 860 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-205ENST00000368213 PLCD1P51178 756 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 FAM193AP78312 1265 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 MAP7D2Q96T17 732 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 PAFAH1B1P43034 410 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 PHKA1P46020 1223 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 AOX1Q06278 1338 aa12.12□□□□□ -0.47
PTPRK-205ENST00000368213 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 TTC12Q9H892 705 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 SPAG1Q07617 926 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 PPP2R5BQ15173 497 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-205ENST00000368213 GJC1P36383 396 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 OTUD6AQ7L8S5 288 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 GOLGA1Q92805 767 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
PTPRK-205ENST00000368213 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 FAM193BQ96PV7 902 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 CRB1P82279 1406 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 KCNQ2O43526 872 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 GAS7O60861 476 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 MIGA2Q7L4E1 593 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 RNF34Q969K3 372 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 SPICE1Q8N0Z3 855 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-205ENST00000368213 SYNMO15061 1565 aa12.1□□□□□ -0.47
PTPRK-205ENST00000368213 CYP27B1O15528 508 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms