RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SPACA3Q8IXA5 215 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 SLC38A3Q99624 504 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 CEP44Q9C0F1 390 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 PCDHA4Q9UN74 947 aa8.93□□□□□ -0.98
RNU4-40P-201ENST00000364351 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 FANCGO15287 622 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 TRIM37O94972 964 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 NKPD1Q17RQ9 610 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 FLAD1Q8NFF5 587 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 KRTAP4-7Q9BYR0 210 aa8.92□□□□□ -0.98
RNU4-40P-201ENST00000364351 RING1Q06587 406 aa8.91□□□□□ -0.98
RNU4-40P-201ENST00000364351 ZBTB37Q5TC79 503 aa8.91□□□□□ -0.98
RNU4-40P-201ENST00000364351 LLGL2Q6P1M3 1020 aa8.91□□□□□ -0.98
RNU4-40P-201ENST00000364351 ZSWIM9Q86XI8 627 aa8.91□□□□□ -0.98
RNU4-40P-201ENST00000364351 LRRC10BA6NIK2 292 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 EOMESO95936 686 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 MAPK8P45983 427 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 LRRC14Q15048 493 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 KCNMB1Q16558 191 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 ELMO3Q96BJ8 720 aa8.9□□□□□ -0.98
RNU4-40P-201ENST00000364351 RASIP1Q5U651 963 aa8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 KCT2Q8NC54 265 aa8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 OSBPL7Q9BZF2 842 aa8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 SRCIN1Q9C0H9 1055 aa8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.89□□□□□ -0.99
RNU4-40P-201ENST00000364351 MLANAQ16655 118 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 FAM84AQ96KN4 292 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 SETDB2Q96T68 719 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 PPM1HQ9ULR3 514 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 CTNND2Q9UQB3 1225 aa8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 GNEQ9Y223 722 aaKnown RBP8.88□□□□□ -0.99
RNU4-40P-201ENST00000364351 PITPNM2Q9BZ72 1349 aa8.87□□□□□ -0.99
RNU4-40P-201ENST00000364351 CLCN7P51798 805 aa8.87□□□□□ -0.99
RNU4-40P-201ENST00000364351 MESP2Q0VG99 397 aa8.87□□□□□ -0.99
RNU4-40P-201ENST00000364351 ZNF507Q8TCN5 953 aa8.87□□□□□ -0.99
RNU4-40P-201ENST00000364351 FAM53CQ9NYF3 392 aa8.87□□□□□ -0.99
RNU4-40P-201ENST00000364351 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 ZNF503-AS2A6NEH8 195 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 SUPT5HO00267 1087 aaKnown RBP8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 LRIG2O94898 1065 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 INPP5AQ14642 412 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 FBF1Q8TES7 1133 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 CYP8B1Q9UNU6 501 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 MAPK8IP1Q9UQF2 711 aa8.86□□□□□ -0.99
RNU4-40P-201ENST00000364351 FAM155AB1AL88 458 aaPredicted RBP8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 SLITRK5O94991 958 aa8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 CELA3AP09093 270 aa8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 AFMP43652 599 aa8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 FYB2Q5VWT5 728 aa8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 LIN37Q96GY3 246 aaPredicted RBP8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 CARS2Q9HA77 564 aaKnown RBP8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 WWC3Q9ULE0 1092 aa8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 TPX2Q9ULW0 747 aaKnown RBP8.85□□□□□ -0.99
RNU4-40P-201ENST00000364351 GIPC1O14908 333 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 FBLN7Q53RD9 439 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 CDKAL1Q5VV42 579 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 LRFN4Q6PJG9 635 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 HSPA12BQ96MM6 686 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 LMCD1Q9NZU5 365 aa8.84□□□□□ -0.99
RNU4-40P-201ENST00000364351 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 PRR33A8MZF0 331 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 PTPN11Q06124 597 aaPredicted RBP8.83□□□□□ -1
RNU4-40P-201ENST00000364351 SCARA3Q6AZY7 606 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 ALG1LQ6GMV1 187 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 ZSCAN29Q8IWY8 852 aaPredicted RBP8.83□□□□□ -1
RNU4-40P-201ENST00000364351 MIPEPQ99797 713 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 FBRSQ9HAH7 460 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 ATP13A1Q9HD20 1204 aa8.83□□□□□ -1
RNU4-40P-201ENST00000364351 BRD1O95696 1058 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 FMR1Q06787 632 aaKnown RBP eCLIP8.82□□□□□ -1
RNU4-40P-201ENST00000364351 SFRP5Q5T4F7 317 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 CYFIP1Q7L576 1253 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 HDXQ7Z353 690 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 PLPPR2Q96GM1 343 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 SEMA3GQ9NS98 782 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 SPG7Q9UQ90 795 aa8.82□□□□□ -1
RNU4-40P-201ENST00000364351 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.81□□□□□ -1
RNU4-40P-201ENST00000364351 FGD1P98174 961 aa8.81□□□□□ -1
RNU4-40P-201ENST00000364351 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
RNU4-40P-201ENST00000364351 MPZL3Q6UWV2 235 aa8.81□□□□□ -1
RNU4-40P-201ENST00000364351 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
RNU4-40P-201ENST00000364351 KIRREL1Q96J84 757 aa8.81□□□□□ -1
RNU4-40P-201ENST00000364351 H3BS24 57 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 GLI1P08151 1106 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 USP17L7P0C7H9 530 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 ETF1P62495 437 aaKnown RBP8.8□□□□□ -1
RNU4-40P-201ENST00000364351 ATP2B2Q01814 1243 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 NKG7Q16617 165 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.8□□□□□ -1
RNU4-40P-201ENST00000364351 MFSD4AQ8N468 514 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 BHLHE22Q8NFJ8 381 aaPredicted RBP8.8□□□□□ -1
RNU4-40P-201ENST00000364351 RIN3Q8TB24 985 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 WNT10AQ9GZT5 417 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 C12orf49Q9H741 205 aa8.8□□□□□ -1
RNU4-40P-201ENST00000364351 FAM8A1Q9UBU6 413 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms