RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 PRR20BP86481 221 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRR20AP86496 221 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SLC7A5Q01650 507 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HDAC1Q13547 482 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UBE4AQ14139 1066 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CBX2Q14781 532 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AXDND1Q5T1B0 1012 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CDCP2Q5VXM1 449 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MAP1SQ66K74 1059 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 KIAA1211LQ6NV74 962 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ADAMTSL4Q6UY14 1074 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 DDX46Q7L014 1031 aaKnown RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NLRC3Q7RTR2 1065 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 VN1R5Q7Z5H4 357 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PDZD3Q86UT5 571 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RAVER1Q8IY67 606 aaKnown RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AHI1Q8N157 1196 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AFAP1L2Q8N4X5 818 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RIN3Q8TB24 985 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SLC30A3Q99726 388 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CDC6Q99741 560 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MRPL4Q9BYD3 311 aaKnown RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ADAM19Q9H013 955 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NUCKS1Q9H1E3 243 aaKnown RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CACNA2D2Q9NY47 1150 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 LTBP3Q9NS15 1303 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TRAV20A0A0B4J274 112 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SLC22A31A6NKX4 558 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TNFRSF10AO00220 468 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CREB3O43889 395 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 BNIP3LO60238 219 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 KRT18P05783 430 aaKnown RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GSTP1P09211 210 aaKnown RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ACRP10323 421 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ESRRAP11474 423 aaPredicted RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 L1CAMP32004 1257 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CCNFP41002 786 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HNRNPUQ00839 825 aaKnown RBP eCLIP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PDE4BQ07343 736 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UBAP2LQ14157 1087 aaKnown RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MAP7Q14244 749 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZYXQ15942 572 aaKnown RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MAP9Q49MG5 647 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FAM182BQ5T319 152 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TMED8Q6PL24 325 aaPredicted RBP4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HFE2Q6ZVN8 426 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NECAB2Q7Z6G3 386 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SCUBE1Q8IWY4 988 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MICALL1Q8N3F8 863 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PPM1KQ8N3J5 372 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UBR7Q8N806 425 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CNNM2Q9H8M5 875 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRDM16Q9HAZ2 1276 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NDFIP2Q9NV92 336 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 REV1Q9UBZ9 1251 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 DACH1Q9UI36 760 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PCDHA4Q9UN74 947 aa4.91□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TRBV23-1A0A0A0MS06 115 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 E2F8A0AVK6 867 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RAPGEF3O95398 923 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NPTXRO95502 500 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 EYA4O95677 639 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 THBS1P07996 1170 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PLCG1P19174 1290 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 EIF2AK2P19525 551 aaKnown RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MLLT1Q03111 559 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MCL1Q07820 350 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 HSP90AA2PQ14568 343 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 BBS9Q3SYG4 887 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GNPTABQ3T906 1256 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TMEM201Q5SNT2 666 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RNF219Q5W0B1 726 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 OVOS1Q6IE37 1185 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CNNM4Q6P4Q7 775 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RIPOR1Q6ZS17 1223 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TSHZ1Q6ZSZ6 1077 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 HDXQ7Z353 690 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RAB44Q7Z6P3 723 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CACTIN-AS1Q8N1I8 211 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MYO1HQ8N1T3 1032 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 KLHL6Q8WZ60 621 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DDX1Q92499 740 aaKnown RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 EXOC2Q96KP1 924 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZNF214Q9UL59 606 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ATXN7L1Q9ULK2 861 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MRPS23Q9Y3D9 190 aaKnown RBP4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 COMMD10Q9Y6G5 202 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PHLDB1Q86UU1 1377 aa4.9□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SENP3-EIF4A1A0A087X0R7 540 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 HMGB1P1B2RPK0 211 aaPredicted RBP4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MYL1P05976 194 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NEK2P51955 445 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CABP4P57796 275 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 IKBKEQ14164 716 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SV2CQ496J9 727 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 WIPI1Q5MNZ9 446 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms