RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RAC1P63000 192 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 MLECQ14165 292 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 DDR2Q16832 855 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 INTS3Q68E01 1043 aaKnown RBP5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 SDE2Q6IQ49 451 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 LINC00114Q6XXX2 140 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 C12orf40Q86WS4 652 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 TMPRSS13Q9BYE2 586 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 WNT10AQ9GZT5 417 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 TNKS2Q9H2K2 1166 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 ANTXR1Q9H6X2 564 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 ENAMQ9NRM1 1142 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 GMIPQ9P107 970 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 HIF3AQ9Y2N7 669 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 A0A1W2PQH9 124 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 SLC22A31A6NKX4 558 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 FANCGO15287 622 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 ARHGEF15O94989 841 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 ID3Q02535 119 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 FXNQ16595 210 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 DUOXA2Q1HG44 320 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 CDCP2Q5VXM1 449 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 RUFY4Q6ZNE9 571 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 UBASH3BQ8TF42 649 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 TRIM11Q96F44 468 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 CNNM2Q9H8M5 875 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 SUGCTQ9HAC7 445 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 RAD18Q9NS91 495 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 CRIM1Q9NZV1 1036 aa5.59□□□□□ -1.51
RNU6-28P-201ENST00000362378 FAM221BA6H8Z2 402 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 TNFRSF10CO14798 259 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 DNAJA2O60884 412 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 WISP1O95388 367 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 PGRP06401 933 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 NME1P15531 152 aaKnown RBP5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 GRK4P32298 578 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZBTB37Q5TC79 503 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 SMG8Q8ND04 991 aaKnown RBP5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 NEDD1Q8NHV4 660 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 ATG4CQ96DT6 458 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 RUSC1Q9BVN2 902 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 RRAGCQ9HB90 399 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 PPP1R9AQ9ULJ8 1098 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 SLC12A7Q9Y666 1083 aa5.58□□□□□ -1.52
RNU6-28P-201ENST00000362378 PRAMEF27A3QJZ7 478 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 SPDYE3A6NKU9 549 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 ACRP10323 421 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 NTF4P34130 210 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 SNRPNP63162 240 aaKnown RBP5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 RASGRF1Q13972 1273 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 PPP2R5EQ16537 467 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 PPM1JQ5JR12 505 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 EGFLAMQ63HQ2 1017 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 IGF2-ASQ6U949 168 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 NLRC3Q7RTR2 1065 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 MCATQ8IVS2 390 aaKnown RBP5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 RNF214Q8ND24 703 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 ACSF2Q96CM8 615 aaPredicted RBP5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 PLVAPQ9BX97 442 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 RNF208Q9H0X6 261 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 GSX1Q9H4S2 264 aaPredicted RBP5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 ST7Q9NRC1 585 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 DISC1Q9NRI5 854 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 MAPK8IP1Q9UQF2 711 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 CSADQ9Y600 493 aa5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 MRPL42Q9Y6G3 142 aaKnown RBP5.57□□□□□ -1.52
RNU6-28P-201ENST00000362378 CHURC1-FNTBB4DL54 471 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 PIK3R2O00459 728 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 GNB5O14775 395 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 PDPK1O15530 556 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ELNP15502 786 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ETF1P62495 437 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 AKAP4Q5JQC9 854 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 NUTM2GQ5VZR2 741 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 LARP1BQ659C4 914 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 UNC5AQ6ZN44 842 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ACAD11Q709F0 780 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 MRPL41Q8IXM3 137 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 SLFN12Q8IYM2 578 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 SVOPQ8N4V2 548 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ZNF507Q8TCN5 953 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 RNPC3Q96LT9 517 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 FANCD2OSQ96PS1 177 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 SLC9A7Q96T83 725 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 MRPL18Q9H0U6 180 aaKnown RBP5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 ATXN3LQ9H3M9 355 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 CYP4F12Q9HCS2 524 aa5.56□□□□□ -1.52
RNU6-28P-201ENST00000362378 TJP2Q9UDY2 1190 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms