RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
RAB5B-201ENST00000360299 CIAO1O76071 339 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 GMPSP49915 693 aaPredicted RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 PAF1Q8N7H5 531 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 LRRC2Q9BYS8 371 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 DDNO94850 711 aaPredicted RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 GYS1P13807 737 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 BTDP43251 543 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 VPS36Q86VN1 386 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 OTUD7AQ8TE49 926 aaPredicted RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 TCEANC2Q96MN5 208 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 COA1Q9GZY4 146 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 GLT8D2Q9H1C3 349 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 GDPD2Q9HCC8 539 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 VIRMAQ69YN4 1812 aaKnown RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 PTPDC1A2A3K4 754 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 SPTLC2O15270 562 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 ARHGAP29Q52LW3 1261 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 ZFYVE27Q5T4F4 411 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 APOBEC3FQ8IUX4 373 aaKnown RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 SPATA5Q8NB90 893 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 GPAA1O43292 621 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 ERLIN2O94905 339 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 POTEJP0CG39 1038 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 HOXD10P28358 340 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 CCNA1P78396 465 aa8.01□□□□□ -1.13
RAB5B-201ENST00000360299 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 RRP36Q96EU6 259 aaKnown RBP8.01□□□□□ -1.13
RAB5B-201ENST00000360299 CETN1Q12798 172 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 STYK1Q6J9G0 422 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 NSMFQ6X4W1 530 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 OTUD5Q96G74 571 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ARID3AQ99856 593 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
RAB5B-201ENST00000360299 SNX14Q9Y5W7 946 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 GOLGA6L9A6NEM1 432 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ERLIN1O75477 346 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 RAET1EQ8TD07 263 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 GOPCQ9HD26 462 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 GGA3Q9NZ52 723 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 CLIP2Q9UDT6 1046 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ADAMTSL3P82987 1691 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 DESP17661 470 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 TRIM21P19474 475 aaKnown RBP8□□□□□ -1.13
RAB5B-201ENST00000360299 APOBRQ0VD83 1088 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 SPA17Q15506 151 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ZSCAN23Q3MJ62 389 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 CHST3Q7LGC8 479 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 ARMT1Q9H993 441 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 KLHL10Q6JEL2 608 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 FAM200AQ8TCP9 573 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 CTAGE1Q96RT6 745 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 NBPF3Q9H094 633 aa8□□□□□ -1.13
RAB5B-201ENST00000360299 MYO3BQ8WXR4 1341 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 SYT1P21579 422 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 KRT2P35908 639 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 GPSM2P81274 684 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 RILPL1Q5EBL4 403 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CCDC181Q5TID7 509 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 GPCPD1Q9NPB8 672 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 DEXIO95424 95 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CACNB3P54284 484 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 NAPAP54920 295 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 RAB11FIP4Q86YS3 637 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 SP8Q8IXZ3 490 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CELF1Q92879 486 aaKnown RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 WRNIP1Q96S55 665 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 HAUS7Q99871 368 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 KNDC1Q76NI1 1749 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 MON2Q7Z3U7 1717 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 YEATS4O95619 227 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 LZTS2Q9BRK4 669 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CNPY2Q9Y2B0 182 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 DNM1Q05193 864 aaKnown RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 PTPN14Q15678 1187 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 ANGEL2Q5VTE6 544 aaKnown RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 PRAMEF18Q5VWM3 479 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CCDC174Q6PII3 467 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 KIAA1328Q86T90 577 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 EAF2Q96CJ1 260 aaPredicted RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 TAF1CQ15572 869 aaPredicted RBP7.99□□□□□ -1.13
RAB5B-201ENST00000360299 CACNA2D4Q7Z3S7 1137 aa7.99□□□□□ -1.13
RAB5B-201ENST00000360299 SEMA3EO15041 775 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PCP11498 1178 aaKnown RBP7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PPP1R2P41236 205 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 SAMD7Q7Z3H4 446 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 HEATR3Q7Z4Q2 680 aa7.98□□□□□ -1.13
RAB5B-201ENST00000360299 PODNQ7Z5L7 613 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms