RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 SALL3Q9BXA9 1300 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 ERC2O15083 957 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 TBC1D8O95759 1140 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 MX1P20591 662 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 SNAPC2Q13487 334 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 UBE3CQ15386 1083 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 SLFNL1Q499Z3 407 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 SMC5Q8IY18 1101 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 TNS4Q8IZW8 715 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 PICK1Q9NRD5 415 aa20.59■□□□□ 0.89
FAM3D-201ENST00000358781 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.89
FAM3D-201ENST00000358781 IGHDP01880 384 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 CETPP11597 493 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 IRX6P78412 446 aaPredicted RBP20.58■□□□□ 0.89
FAM3D-201ENST00000358781 CCL15Q16663 113 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 METTL16Q86W50 562 aaKnown RBP20.58■□□□□ 0.89
FAM3D-201ENST00000358781 KBTBD3Q8NAB2 608 aa20.58■□□□□ 0.89
FAM3D-201ENST00000358781 CRNKL1Q9BZJ0 848 aaKnown RBP20.58■□□□□ 0.89
FAM3D-201ENST00000358781 CHGBP05060 677 aa20.57■□□□□ 0.88
FAM3D-201ENST00000358781 HLA-DOAP06340 250 aa20.57■□□□□ 0.88
FAM3D-201ENST00000358781 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
FAM3D-201ENST00000358781 LCORLQ8N3X6 602 aa20.57■□□□□ 0.88
FAM3D-201ENST00000358781 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
FAM3D-201ENST00000358781 NAV1Q8NEY1 1877 aa20.57■□□□□ 0.88
FAM3D-201ENST00000358781 PTPRAP18433 802 aa20.56■□□□□ 0.88
FAM3D-201ENST00000358781 R3HDMLQ9H3Y0 253 aa20.56■□□□□ 0.88
FAM3D-201ENST00000358781 ARMT1Q9H993 441 aa20.56■□□□□ 0.88
FAM3D-201ENST00000358781 DDX60LQ5H9U9 1706 aaKnown RBP20.56■□□□□ 0.88
FAM3D-201ENST00000358781 MBD4O95243 580 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 RRP1BQ14684 758 aaKnown RBP20.55■□□□□ 0.88
FAM3D-201ENST00000358781 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 NOM1Q5C9Z4 860 aaKnown RBP20.55■□□□□ 0.88
FAM3D-201ENST00000358781 IFFO2Q5TF58 517 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 CRACR2BQ8N4Y2 399 aaPredicted RBP20.55■□□□□ 0.88
FAM3D-201ENST00000358781 TRIM34Q9BYJ4 488 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 DNAJC18Q9H819 358 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 STAP2Q9UGK3 403 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 ZHX2Q9Y6X8 837 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
FAM3D-201ENST00000358781 CXCL11O14625 94 aa20.54■□□□□ 0.88
FAM3D-201ENST00000358781 CAP2P40123 477 aa20.54■□□□□ 0.88
FAM3D-201ENST00000358781 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
FAM3D-201ENST00000358781 GPR25O00155 361 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 TTC6Q86TZ1 520 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 FAM43AQ8N2R8 423 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 SDR42E1Q8WUS8 393 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 EHD4Q9H223 541 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 AFG3L2Q9Y4W6 797 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 BTBD19C9JJ37 291 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 ZFYP08048 801 aaPredicted RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 PDE1AP54750 535 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 NUCB1Q02818 461 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 CRHR2Q13324 411 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 ZNF296Q8WUU4 475 aaPredicted RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 PUS7LQ9H0K6 701 aaKnown RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 ZCCHC17Q9NP64 241 aaKnown RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 DCP1AQ9NPI6 582 aaPredicted RBP20.53■□□□□ 0.88
FAM3D-201ENST00000358781 SERPINB13Q9UIV8 391 aa20.53■□□□□ 0.88
FAM3D-201ENST00000358781 PTPRFP10586 1907 aa20.52■□□□□ 0.88
FAM3D-201ENST00000358781 PRKAB2O43741 272 aa20.52■□□□□ 0.87
FAM3D-201ENST00000358781 POLR3DP05423 398 aaPredicted RBP20.52■□□□□ 0.87
FAM3D-201ENST00000358781 MOGSQ13724 837 aa20.52■□□□□ 0.87
FAM3D-201ENST00000358781 LRRFIP1Q32MZ4 808 aaKnown RBP20.52■□□□□ 0.87
FAM3D-201ENST00000358781 CHD1LQ86WJ1 897 aa20.52■□□□□ 0.87
FAM3D-201ENST00000358781 ATP8A2Q9NTI2 1148 aa20.52■□□□□ 0.87
FAM3D-201ENST00000358781 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.87
FAM3D-201ENST00000358781 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
FAM3D-201ENST00000358781 PLCD1P51178 756 aa20.51■□□□□ 0.87
FAM3D-201ENST00000358781 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
FAM3D-201ENST00000358781 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
FAM3D-201ENST00000358781 CCDC84Q86UT8 332 aaPredicted RBP20.51■□□□□ 0.87
FAM3D-201ENST00000358781 APPBP2Q92624 585 aa20.51■□□□□ 0.87
FAM3D-201ENST00000358781 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
FAM3D-201ENST00000358781 BAZ2AQ9UIF9 1905 aaKnown RBP20.5■□□□□ 0.87
FAM3D-201ENST00000358781 FKTNO75072 461 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 ASNSP08243 561 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 ZFYVE28Q9HCC9 887 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
FAM3D-201ENST00000358781 TRIM75PA6NK02 468 aa20.49■□□□□ 0.87
FAM3D-201ENST00000358781 USP17L5A8MUK1 530 aa20.49■□□□□ 0.87
FAM3D-201ENST00000358781 JAG1P78504 1218 aa20.49■□□□□ 0.87
FAM3D-201ENST00000358781 TATDN1Q6P1N9 297 aa20.49■□□□□ 0.87
FAM3D-201ENST00000358781 FASTKD5Q7L8L6 764 aaKnown RBP20.49■□□□□ 0.87
FAM3D-201ENST00000358781 STRBPQ96SI9 672 aaKnown RBP20.49■□□□□ 0.87
FAM3D-201ENST00000358781 SLC4A4Q9Y6R1 1079 aa20.49■□□□□ 0.87
FAM3D-201ENST00000358781 GDF11O95390 407 aa20.48■□□□□ 0.87
FAM3D-201ENST00000358781 GABPAQ06546 454 aa20.48■□□□□ 0.87
FAM3D-201ENST00000358781 DGKZQ13574 1117 aa20.48■□□□□ 0.87
FAM3D-201ENST00000358781 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms