RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
RTN3-205ENST00000356000 FILIP1LQ4L180 1135 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 CYB5D1Q6P9G0 228 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
RTN3-205ENST00000356000 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.82■□□□□ 0.44
RTN3-205ENST00000356000 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 GGA2Q9UJY4 613 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 NWD2Q9ULI1 1742 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 NAP1L1P55209 391 aaKnown RBP17.82■□□□□ 0.44
RTN3-205ENST00000356000 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 ZNF569Q5MCW4 686 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
RTN3-205ENST00000356000 HMOX1P09601 288 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 BRAPQ7Z569 592 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 FUKQ8N0W3 1084 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
RTN3-205ENST00000356000 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
RTN3-205ENST00000356000 TPX2Q9ULW0 747 aaKnown RBP17.81■□□□□ 0.44
RTN3-205ENST00000356000 GOLGA8KD6RF30 607 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 MYL5Q02045 173 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 STK3Q13188 491 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 PTPN21Q16825 1174 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 PDILTQ8N807 584 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 C3orf20Q8ND61 904 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 ADGRG1Q9Y653 693 aa17.81■□□□□ 0.44
RTN3-205ENST00000356000 RPSAP08865 295 aaKnown RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 NDUFA8P51970 172 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 ADKP55263 362 aaKnown RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 C1QTNF12Q5T7M4 302 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 BLOC1S2Q6QNY1 142 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 TRIM74Q86UV6 250 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 TRIM73Q86UV7 250 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 RPUSD2Q8IZ73 545 aaKnown RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 RBM8AQ9Y5S9 174 aaKnown RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 SBNO1A3KN83 1393 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 A0A1B0GVL5 298 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 GOLGA6BA6NDN3 693 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 CCT2P78371 535 aaKnown RBP17.8■□□□□ 0.44
RTN3-205ENST00000356000 E2F5Q15329 346 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 ANKRD23Q86SG2 305 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
RTN3-205ENST00000356000 ENO4A6NNW6 628 aa17.79■□□□□ 0.44
RTN3-205ENST00000356000 PPP1R12BO60237 982 aaPredicted RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 MTF1Q14872 753 aa17.79■□□□□ 0.44
RTN3-205ENST00000356000 NAA16Q6N069 864 aaPredicted RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
RTN3-205ENST00000356000 C8orf37Q96NL8 207 aa17.79■□□□□ 0.44
RTN3-205ENST00000356000 NAPGQ99747 312 aaPredicted RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
RTN3-205ENST00000356000 SLC35F6Q8N357 371 aa17.79■□□□□ 0.44
RTN3-205ENST00000356000 GOLGA6L7A0A1B0GV03 622 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 TARSL2A2RTX5 802 aaKnown RBP17.78■□□□□ 0.44
RTN3-205ENST00000356000 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 ATP5JP18859 108 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 NAA35Q5VZE5 725 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 TCEANC2Q96MN5 208 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 SLC39A2Q9NP94 309 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 USP21Q9UK80 565 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 PES1O00541 588 aaKnown RBP17.78■□□□□ 0.44
RTN3-205ENST00000356000 CAPRIN2Q6IMN6 1127 aaKnown RBP17.78■□□□□ 0.44
RTN3-205ENST00000356000 SELENOOQ9BVL4 669 aa17.78■□□□□ 0.44
RTN3-205ENST00000356000 F6X3S4 739 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 SLC27A2O14975 620 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.44
RTN3-205ENST00000356000 SLC4A2P04920 1241 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 AMPD2Q01433 879 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 IFFO1Q0D2I5 559 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 SPECC1LQ69YQ0 1117 aa17.77■□□□□ 0.44
RTN3-205ENST00000356000 ARHGEF10O15013 1369 aa17.77■□□□□ 0.43
RTN3-205ENST00000356000 A0A0U1RQJ8 604 aa17.77■□□□□ 0.43
RTN3-205ENST00000356000 MIS18BP1Q6P0N0 1132 aa17.77■□□□□ 0.43
RTN3-205ENST00000356000 ATRIPQ8WXE1 791 aa17.77■□□□□ 0.43
RTN3-205ENST00000356000 MAP4K1Q92918 833 aa17.77■□□□□ 0.43
RTN3-205ENST00000356000 PPFIA2O75334 1257 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 EPB41P11171 864 aaKnown RBP17.76■□□□□ 0.43
RTN3-205ENST00000356000 PDCLQ13371 301 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 C6orf89Q6UWU4 347 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 SOWAHDA6NJG2 315 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 AHCYL1O43865 530 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 FESP07332 822 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 FAM163BP0C2L3 166 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 CCDC114Q96M63 670 aa17.76■□□□□ 0.43
RTN3-205ENST00000356000 SLIT2O94813 1529 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 THEMIS2Q5TEJ8 643 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 BZW1Q7L1Q6 419 aaKnown RBP17.75■□□□□ 0.43
RTN3-205ENST00000356000 GDAP1L1Q96MZ0 367 aa17.75■□□□□ 0.43
RTN3-205ENST00000356000 PANX2Q96RD6 677 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms