RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TROVE2P10155 538 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 LONRF3Q496Y0 759 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRIM68Q6AZZ1 485 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 IFIH1Q9BYX4 1025 aaKnown RBP14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 SBNO2Q9Y2G9 1366 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.15
SYNCRIP-201ENST00000355238 STX2P32856 288 aa14.15□□□□□ -0.15
SYNCRIP-201ENST00000355238 ARL1P40616 181 aaPredicted RBP14.15□□□□□ -0.15
SYNCRIP-201ENST00000355238 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.15
SYNCRIP-201ENST00000355238 HGSO14964 777 aaPredicted RBP14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 ADKP55263 362 aaKnown RBP14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 SRGAP1Q7Z6B7 1085 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 GDAP1L1Q96MZ0 367 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 ASIC3Q9UHC3 531 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 FLOT1O75955 427 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 OTUD7AQ8TE49 926 aaPredicted RBP14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 ZNF622Q969S3 477 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■□□□□ 10.3
SYNCRIP-201ENST00000355238 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 ZPR1O75312 459 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 OR8K1Q8NGG5 319 aa14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 TCP1P17987 556 aaKnown RBP14.14□□□□□ -0.15
SYNCRIP-201ENST00000355238 PHLPP2Q6ZVD8 1323 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 ODF2LQ9ULJ1 636 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 MAGEB6P1A0A0J9YX57 407 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 ATP1A2P50993 1020 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 MAIP1Q8WWC4 291 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 PPP1R13BQ96KQ4 1090 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 LGSNQ5TDP6 509 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 PEX26Q7Z412 305 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 TDRD7Q8NHU6 1098 aaKnown RBP14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 CDC23Q9UJX2 597 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 STX10O60499 249 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 COPS6Q7L5N1 327 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 PLIN2Q99541 437 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 Q9H521 79 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 RXRAP19793 462 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 RBM6P78332 1123 aaKnown RBP14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 LONRF2Q1L5Z9 754 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 NELFBQ8WX92 580 aa14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 MAK16Q9BXY0 300 aaKnown RBP14.13□□□□□ -0.15
SYNCRIP-201ENST00000355238 IQGAP2Q13576 1575 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 CLTAP09496 248 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 PSMB7Q99436 277 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 SMIM24O75264 130 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 KRT15P19012 456 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 TRMT1LQ7Z2T5 733 aaKnown RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 VCX3AQ9NNX9 186 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 ANGEL1Q9UNK9 670 aaKnown RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 TFCP2Q12800 502 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 RASIP1Q5U651 963 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 SFMBT2Q5VUG0 894 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 DIS3L2Q8IYB7 885 aaKnown RBP14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 PSMD1Q99460 953 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 ZKSCAN3Q9BRR0 538 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 KIF24Q5T7B8 1368 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 NR1I2O75469 434 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 P3H4Q92791 437 aa14.12□□□□□ -0.15
SYNCRIP-201ENST00000355238 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 CALUO43852 315 aaPredicted RBP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 TNNI2P48788 182 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 NBPF14Q5TI25 921 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 AFAP1L2Q8N4X5 818 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 SUDS3Q9H7L9 328 aaPredicted RBP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 MYO1AQ9UBC5 1043 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 TPX2Q9ULW0 747 aaKnown RBP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 OPHN1O60890 802 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 TRIML1Q8N9V2 468 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 HSP90AA5PQ58FG0 334 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 CCDC151A5D8V7 595 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 ARMC9Q7Z3E5 817 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 DESI2Q9BSY9 194 aa14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.11□□□□□ -0.15
SYNCRIP-201ENST00000355238 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 ITIH3Q06033 890 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 ZBTB17Q13105 803 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 NCOA5Q9HCD5 579 aaKnown RBP14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 AGTPBP1Q9UPW5 1226 aa14.1□□□□□ -0.15
SYNCRIP-201ENST00000355238 MAPK8IP1Q9UQF2 711 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms