RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 DHX58Q96C10 678 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 L2HGDHQ9H9P8 463 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 ABCF2Q9UG63 623 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 CASQ1P31415 396 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 TOGARAM2Q6ZUX3 1019 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 SPATA5Q8NB90 893 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 CCP110O43303 1012 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 ZSCAN12O43309 604 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 HSPA2P54652 639 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 WDR24Q96S15 920 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 LZTFL1Q9NQ48 299 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 TACC3Q9Y6A5 838 aa16.69■□□□□ 0.26
SMTN-202ENST00000347557 FAM205CA6NFA0 338 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 FANCGO15287 622 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 TOB1P50616 345 aaPredicted RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 BCAMP50895 628 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 SLC20A2Q08357 652 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 RASGRF1Q13972 1273 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 IRX2Q9BZI1 471 aaPredicted RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 ARGLU1Q9NWB6 273 aaPredicted RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 MST1RQ04912 1400 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 PRDM1O75626 825 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 MTF1Q14872 753 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 TRIM65Q6PJ69 517 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
SMTN-202ENST00000347557 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
SMTN-202ENST00000347557 ADAMTS7Q9UKP4 1686 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 ABCC6O95255 1503 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 SDR42E1Q8WUS8 393 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 VPS54Q9P1Q0 977 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 MMP1P03956 469 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 TICAM2Q86XR7 235 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
SMTN-202ENST00000347557 RIC1Q4ADV7 1423 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 PNMA6AP0CW24 399 aaPredicted RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 NACAP1Q9BZK3 213 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 SLC5A1P13866 664 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
SMTN-202ENST00000347557 WASF1Q92558 559 aa16.66■□□□□ 0.26
SMTN-202ENST00000347557 H2AFXP16104 143 aaPredicted RBP16.65■□□□□ 0.26
SMTN-202ENST00000347557 SPECC1LQ69YQ0 1117 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 LPIN2Q92539 896 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 KCNG1Q9UIX4 513 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 PDE8AO60658 829 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 SLC4A8Q2Y0W8 1093 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 BCCIPQ9P287 314 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMTN-202ENST00000347557 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 NWD2Q9ULI1 1742 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 MYH15Q9Y2K3 1946 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 TEX33O43247 280 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
SMTN-202ENST00000347557 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 KRT23Q9C075 422 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 ZCCHC17Q9NP64 241 aaKnown RBP16.65■□□□□ 0.26
SMTN-202ENST00000347557 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.65■□□□□ 0.26
SMTN-202ENST00000347557 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
SMTN-202ENST00000347557 FHOD1Q9Y613 1164 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
SMTN-202ENST00000347557 PHLPP2Q6ZVD8 1323 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 CYP2D7A0A087X1C5 515 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 SOWAHDA6NJG2 315 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 RAI14Q9P0K7 980 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
SMTN-202ENST00000347557 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms