RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 C4BP0C0L5 1744 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 PDIA6Q15084 440 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
LRP8-202ENST00000347547 IP6K1Q92551 441 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 HPCAL4Q9UM19 191 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
LRP8-202ENST00000347547 MFAP3LO75121 409 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
LRP8-202ENST00000347547 POSTNQ15063 836 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 PXDNQ92626 1479 aa17.8■□□□□ 0.44
LRP8-202ENST00000347547 A0A0U1RQJ8 604 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 ANKRD65E5RJM6 399 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 PRC1O43663 620 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 ERLIN2O94905 339 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 PLCD1P51178 756 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 RBL2Q08999 1139 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 MICALL1Q8N3F8 863 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
LRP8-202ENST00000347547 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 ATRIPQ8WXE1 791 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 MED15Q96RN5 788 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 GOLIM4O00461 696 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 EXOC5O00471 708 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
LRP8-202ENST00000347547 HSP90AA4PQ58FG1 418 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 ZNF530Q6P9A1 599 aaPredicted RBP17.79■□□□□ 0.44
LRP8-202ENST00000347547 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 IGSF22Q8N9C0 903 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 CLIC6Q96NY7 704 aa17.79■□□□□ 0.44
LRP8-202ENST00000347547 TARSL2A2RTX5 802 aaKnown RBP17.78■□□□□ 0.44
LRP8-202ENST00000347547 USP8P40818 1118 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 USP14P54578 494 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 TTC39AQ5SRH9 613 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 CNGA4Q8IV77 575 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 SECISBP2LQ93073 1101 aaKnown RBP17.78■□□□□ 0.44
LRP8-202ENST00000347547 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
LRP8-202ENST00000347547 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 MYO6Q9UM54 1294 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 CPDO75976 1380 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 ITIH6Q6UXX5 1313 aa17.78■□□□□ 0.44
LRP8-202ENST00000347547 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
LRP8-202ENST00000347547 MPRIPQ6WCQ1 1025 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 KRI1Q8N9T8 703 aaKnown RBP17.77■□□□□ 0.44
LRP8-202ENST00000347547 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 SAMSN1Q9NSI8 373 aaKnown RBP17.77■□□□□ 0.44
LRP8-202ENST00000347547 SEMA3EO15041 775 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 FOXN1O15353 648 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 ATF3P18847 181 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 ARHGAP25P42331 645 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 E2F4Q16254 413 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 KRT40Q6A162 431 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 KRT28Q7Z3Y7 464 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 TMTC1Q8IUR5 882 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 SPATA20Q8TB22 786 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 COG1Q8WTW3 980 aa17.77■□□□□ 0.44
LRP8-202ENST00000347547 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
LRP8-202ENST00000347547 COL18A1P39060 1754 aa17.77■□□□□ 0.43
LRP8-202ENST00000347547 ZMYM6O95789 1325 aa17.77■□□□□ 0.43
LRP8-202ENST00000347547 WDR17Q8IZU2 1322 aa17.77■□□□□ 0.43
LRP8-202ENST00000347547 CDKL5O76039 1030 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 ANTXR2P58335 489 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 AMOTQ4VCS5 1084 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 KAT2BQ92831 832 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 PLEKHA4Q9H4M7 779 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 CXorf56Q9H5V9 222 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 WWC3Q9ULE0 1092 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 CCDC196A0A1B0GTZ2 297 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 TEX33O43247 280 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 SF3B2Q13435 895 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 IMMTQ16891 758 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
LRP8-202ENST00000347547 ATXN2Q99700 1313 aaKnown RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 ZNF335Q9H4Z2 1342 aaPredicted RBP17.76■□□□□ 0.43
LRP8-202ENST00000347547 STIM1Q13586 685 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 KANK3Q6NY19 840 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 GPATCH11Q8N954 259 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 KCNH5Q8NCM2 988 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
LRP8-202ENST00000347547 M0R2C6 588 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 EBAG9O00559 213 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
LRP8-202ENST00000347547 CCDC172P0C7W6 258 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 SPATA1Q5VX52 437 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
LRP8-202ENST00000347547 FAM169AQ9Y6X4 670 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms