RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SALL3Q9BXA9 1300 aa19.54■□□□□ 0.72
RAB5C-201ENST00000346213 ZNF532Q9HCE3 1301 aa19.54■□□□□ 0.72
RAB5C-201ENST00000346213 BTBD19C9JJ37 291 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 DGKZQ13574 1117 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 ABHD8Q96I13 439 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 PAG1Q9NWQ8 432 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 KCNH4Q9UQ05 1017 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 DOCK1Q14185 1865 aa19.53■□□□□ 0.72
RAB5C-201ENST00000346213 PTPRAP18433 802 aa19.52■□□□□ 0.72
RAB5C-201ENST00000346213 SLC9C2Q5TAH2 1124 aa19.52■□□□□ 0.72
RAB5C-201ENST00000346213 SCYL3Q8IZE3 742 aa19.52■□□□□ 0.72
RAB5C-201ENST00000346213 LCORLQ8N3X6 602 aa19.52■□□□□ 0.72
RAB5C-201ENST00000346213 ZSWIM8A7E2V4 1837 aa19.52■□□□□ 0.72
RAB5C-201ENST00000346213 PPATQ06203 517 aa19.52■□□□□ 0.71
RAB5C-201ENST00000346213 HOOK2Q96ED9 719 aa19.52■□□□□ 0.71
RAB5C-201ENST00000346213 TBC1D12O60347 775 aa19.51■□□□□ 0.71
RAB5C-201ENST00000346213 MAP4K4O95819 1239 aaPredicted RBP19.51■□□□□ 0.71
RAB5C-201ENST00000346213 GTF2A2P52657 109 aa19.51■□□□□ 0.71
RAB5C-201ENST00000346213 MAP3K12Q12852 859 aa19.51■□□□□ 0.71
RAB5C-201ENST00000346213 GPAT2Q6NUI2 795 aa19.51■□□□□ 0.71
RAB5C-201ENST00000346213 PRKAB2O43741 272 aa19.5■□□□□ 0.71
RAB5C-201ENST00000346213 BAG3O95817 575 aa19.5■□□□□ 0.71
RAB5C-201ENST00000346213 ADD2P35612 726 aa19.5■□□□□ 0.71
RAB5C-201ENST00000346213 INHBEP58166 350 aa19.5■□□□□ 0.71
RAB5C-201ENST00000346213 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
RAB5C-201ENST00000346213 PI4K2BQ8TCG2 481 aa19.5■□□□□ 0.71
RAB5C-201ENST00000346213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
RAB5C-201ENST00000346213 IGHDP01880 384 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 ECHDC1Q9NTX5 307 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 AFG3L2Q9Y4W6 797 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 BRCA2P51587 3418 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 SDR42E1Q8WUS8 393 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 ZHX2Q9Y6X8 837 aa19.49■□□□□ 0.71
RAB5C-201ENST00000346213 ADGRA2Q96PE1 1338 aa19.48■□□□□ 0.71
RAB5C-201ENST00000346213 CYP2D6P10635 497 aa19.48■□□□□ 0.71
RAB5C-201ENST00000346213 PLCD1P51178 756 aa19.48■□□□□ 0.71
RAB5C-201ENST00000346213 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
RAB5C-201ENST00000346213 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
RAB5C-201ENST00000346213 NOL10Q9BSC4 688 aaKnown RBP19.48■□□□□ 0.71
RAB5C-201ENST00000346213 PTPRFP10586 1907 aa19.48■□□□□ 0.71
RAB5C-201ENST00000346213 ATAD5Q96QE3 1844 aa19.47■□□□□ 0.71
RAB5C-201ENST00000346213 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
RAB5C-201ENST00000346213 CTNND1O60716 968 aaKnown RBP19.47■□□□□ 0.71
RAB5C-201ENST00000346213 GDF11O95390 407 aa19.47■□□□□ 0.71
RAB5C-201ENST00000346213 PLCG2P16885 1265 aa19.47■□□□□ 0.71
RAB5C-201ENST00000346213 HDAC1Q13547 482 aaPredicted RBP19.47■□□□□ 0.71
RAB5C-201ENST00000346213 TTF1Q15361 905 aaPredicted RBP19.47■□□□□ 0.71
RAB5C-201ENST00000346213 PUS7LQ9H0K6 701 aaKnown RBP19.47■□□□□ 0.71
RAB5C-201ENST00000346213 NAV1Q8NEY1 1877 aa19.47■□□□□ 0.71
RAB5C-201ENST00000346213 IGSF3O75054 1194 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 ALDH1A1P00352 501 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 CETPP11597 493 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 CTGFP29279 349 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 CAP2P40123 477 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 CD99L2Q8TCZ2 262 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
RAB5C-201ENST00000346213 FKTNO75072 461 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 MBD4O95243 580 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 TAF1CQ15572 869 aaPredicted RBP19.46■□□□□ 0.71
RAB5C-201ENST00000346213 PRRT2Q7Z6L0 340 aaPredicted RBP19.46■□□□□ 0.71
RAB5C-201ENST00000346213 CTU1Q7Z7A3 348 aaKnown RBP19.46■□□□□ 0.71
RAB5C-201ENST00000346213 ARHGAP39Q9C0H5 1083 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 PI4KBQ9UBF8 816 aa19.46■□□□□ 0.71
RAB5C-201ENST00000346213 TRIM75PA6NK02 468 aa19.45■□□□□ 0.7
RAB5C-201ENST00000346213 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
RAB5C-201ENST00000346213 MYH1P12882 1939 aa19.45■□□□□ 0.7
RAB5C-201ENST00000346213 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
RAB5C-201ENST00000346213 USP5P45974 858 aa19.44■□□□□ 0.7
RAB5C-201ENST00000346213 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
RAB5C-201ENST00000346213 DHX36Q9H2U1 1008 aaKnown RBP19.44■□□□□ 0.7
RAB5C-201ENST00000346213 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
RAB5C-201ENST00000346213 HERC5Q9UII4 1024 aaKnown RBP19.44■□□□□ 0.7
RAB5C-201ENST00000346213 PDHXO00330 501 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 CYP2C8P10632 490 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 SHMT1P34896 483 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 GABPAQ06546 454 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 ANKRD23Q86SG2 305 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 SLC44A5Q8NCS7 719 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 OSBP2Q969R2 916 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 PICK1Q9NRD5 415 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 LOC285556D6RIA3 1793 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 CXCL11O14625 94 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 OTOP1Q7RTM1 612 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 MYH7P12883 1935 aa19.43■□□□□ 0.7
RAB5C-201ENST00000346213 ECM2O94769 699 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-201ENST00000346213 KBTBD3Q8NAB2 608 aa19.42■□□□□ 0.7
RAB5C-201ENST00000346213 CPA4Q9UI42 421 aa19.42■□□□□ 0.7
RAB5C-201ENST00000346213 M0R2C6 588 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 TLR2O60603 784 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 GUCY1A2P33402 732 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 SPP2Q13103 211 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 UBE3CQ15386 1083 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 C17orf99Q6UX52 265 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 SMC5Q8IY18 1101 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 DYNLL2Q96FJ2 89 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 SEC62Q99442 399 aaKnown RBP19.41■□□□□ 0.7
RAB5C-201ENST00000346213 ZBTB21Q9ULJ3 1066 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms