RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 HOMER2Q9NSB8 354 aa8.62□□□□□ -1.03
LIN28B-201ENST00000345080 MYOM2P54296 1465 aa8.62□□□□□ -1.03
LIN28B-201ENST00000345080 SPECC1L-ADORA2AF8WAN1 911 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 E2F5Q15329 346 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PHLDB2Q86SQ0 1253 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 LRRC8AQ8IWT6 810 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 CABP1Q9NZU7 370 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 U3KPZ7 1027 aaPredicted RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 AFF2P51816 1311 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 YY1P25490 414 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 CYLC1P35663 651 aaPredicted RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 ECE1P42892 770 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 TRIM58Q8NG06 486 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PFDN4Q9NQP4 134 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 TEX9Q8N6V9 391 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 FLCNQ8NFG4 579 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PPIP5K1Q6PFW1 1433 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 A0A1W2PRG0 241 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 GNAT3A8MTJ3 354 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 TULP2O00295 520 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 GNPATO15228 680 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 OPHN1O60890 802 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 GNGT1P63211 74 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 TMCO5AQ8N6Q1 288 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 MTUS1Q9ULD2 1270 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 BAG3O95817 575 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 C17orf53Q8N3J3 647 aaPredicted RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 FSIP1Q8NA03 581 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 TDRD7Q8NHU6 1098 aaKnown RBP8.61□□□□□ -1.03
LIN28B-201ENST00000345080 BCAS4Q8TDM0 211 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 CBX8Q9HC52 389 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 PYCARDQ9ULZ3 195 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 ZNF711Q9Y462 761 aa8.61□□□□□ -1.03
LIN28B-201ENST00000345080 SNUPNO95149 360 aaKnown RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 PCYT1AP49585 367 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 PSMD6Q15008 389 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 ANKRD2Q9GZV1 360 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 HIP1RO75146 1068 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 MX2P20592 715 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 RASEFQ8IZ41 740 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 C2orf69Q8N8R5 385 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 KIF2CQ99661 725 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 BABAM1Q9NWV8 329 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 NOP53Q9NZM5 478 aaKnown RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 TRMT112Q9UI30 125 aaKnown RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 MACROD2A1Z1Q3 448 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 MGEA5O60502 916 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 ATP5DP30049 168 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 USP5P45974 858 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 MTMR3Q13615 1198 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 TNFAIP1Q13829 316 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 LONRF2Q1L5Z9 754 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 SULT6B1Q6IMI4 303 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 RAB11FIP4Q86YS3 637 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 BAG1Q99933 345 aaPredicted RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 KRT86O43790 486 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 STK10O94804 968 aaKnown RBP8.6□□□□□ -1.03
LIN28B-201ENST00000345080 ICA1Q05084 483 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 CNBD1Q8NA66 436 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 DACT1Q9NYF0 836 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 ADAM21Q9UKJ8 722 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 ADGRF5Q8IZF2 1346 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 SHROOM2Q13796 1616 aa8.6□□□□□ -1.03
LIN28B-201ENST00000345080 SDSP20132 328 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 RASSF2P50749 326 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CNGA4Q8IV77 575 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 AOPEPQ8N6M6 819 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 GPT2Q8TD30 523 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 KCNG4Q8TDN1 519 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 IQCDQ96DY2 449 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 FAM204AQ9H8W3 233 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 PAIP2BQ9ULR5 123 aaKnown RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 RHOXF2BP0C7M4 288 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 CAPRIN2Q6IMN6 1127 aaKnown RBP8.59□□□□□ -1.03
LIN28B-201ENST00000345080 ARHGAP24Q8N264 748 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 PPP1R14CQ8TAE6 165 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 RHOXF2Q9BQY4 288 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■■■□ 21.4
LIN28B-201ENST00000345080 DEUP1Q05D60 604 aa8.59□□□□□ -1.03
LIN28B-201ENST00000345080 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms