RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
SATB1-201ENST00000338745 HAUS7Q99871 368 aa18.61■□□□□ 0.57
SATB1-201ENST00000338745 LDHBP07195 334 aaKnown RBP18.61■□□□□ 0.57
SATB1-201ENST00000338745 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
SATB1-201ENST00000338745 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
SATB1-201ENST00000338745 IRS4O14654 1257 aaPredicted RBP18.61■□□□□ 0.57
SATB1-201ENST00000338745 ZMYM4Q5VZL5 1548 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 NUF2Q9BZD4 464 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 ARMT1Q9H993 441 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 ASIC3Q9UHC3 531 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 RBM26Q5T8P6 1007 aaKnown RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 DDX27Q96GQ7 796 aaKnown RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 RAD50Q92878 1312 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 DDX39AO00148 427 aaKnown RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 CEP104O60308 925 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 ZNF365Q70YC5 407 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 PNOCQ13519 176 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 LIN9Q5TKA1 542 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 TRIM68Q6AZZ1 485 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 POSTNQ15063 836 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 MYO1AQ9UBC5 1043 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 GUCY2FP51841 1108 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 GRM1Q13255 1194 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 PNMA8AQ86V59 439 aaPredicted RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 NUP58Q9BVL2 599 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 MAP3K5Q99683 1374 aa18.6■□□□□ 0.57
SATB1-201ENST00000338745 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
SATB1-201ENST00000338745 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 BLZF1Q9H2G9 400 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 ZNF853P0CG23 659 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 TXKP42681 527 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
SATB1-201ENST00000338745 DEXIO95424 95 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
SATB1-201ENST00000338745 ADKP55263 362 aaKnown RBP18.59■□□□□ 0.57
SATB1-201ENST00000338745 NCAPH2Q6IBW4 605 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 FAM173BQ6P4H8 233 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 VSIG1Q86XK7 387 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 TACC3Q9Y6A5 838 aa18.59■□□□□ 0.57
SATB1-201ENST00000338745 I3L4J1 428 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 ARHGAP25P42331 645 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 GABPAQ06546 454 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 OGFOD1Q8N543 542 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 OTUD7AQ8TE49 926 aaPredicted RBP18.58■□□□□ 0.57
SATB1-201ENST00000338745 TACO1Q9BSH4 297 aaKnown RBP18.58■□□□□ 0.57
SATB1-201ENST00000338745 TBC1D31Q96DN5 1066 aa18.58■□□□□ 0.57
SATB1-201ENST00000338745 PHKBQ93100 1093 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 SH2D4BQ5SQS7 431 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 CASC4Q6P4E1 433 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 FAM227BQ96M60 508 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 VAMP4O75379 141 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 TAF12Q16514 161 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 DYMQ7RTS9 669 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 RILPQ96NA2 401 aa18.58■□□□□ 0.56
SATB1-201ENST00000338745 RAD51AP2Q09MP3 1159 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 CUTAO60888 179 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 SLC9C1Q4G0N8 1177 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 GCNT3O95395 438 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
SATB1-201ENST00000338745 RUFY4Q6ZNE9 571 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 ANKRD42Q8N9B4 389 aa18.57■□□□□ 0.56
SATB1-201ENST00000338745 STK10O94804 968 aaKnown RBP18.57■□□□□ 0.56
SATB1-201ENST00000338745 CFAP221Q4G0U5 840 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 OTUD7BQ6GQQ9 843 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 CCDC105Q8IYK2 499 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 GABPB1Q06547 395 aaPredicted RBP18.56■□□□□ 0.56
SATB1-201ENST00000338745 PAK2Q13177 524 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 CABS1Q96KC9 395 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 RAB3IPQ96QF0 476 aaPredicted RBP18.56■□□□□ 0.56
SATB1-201ENST00000338745 SMTNP53814 917 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 SND1Q7KZF4 910 aaKnown RBP eCLIP18.56■□□□□ 0.56
SATB1-201ENST00000338745 LLPHQ9BRT6 129 aaKnown RBP18.56■□□□□ 0.56
SATB1-201ENST00000338745 KDM5BQ9UGL1 1544 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 STRN3Q13033 797 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 TRPC3Q13507 836 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 TTC38Q5R3I4 469 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 MYL10Q9BUA6 226 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
SATB1-201ENST00000338745 PPP1R2P41236 205 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 MUM1Q2TAK8 710 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 AFAP1L2Q8N4X5 818 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 BAIAP2L1Q9UHR4 511 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 VCXQ9H320 206 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
SATB1-201ENST00000338745 CETN3O15182 167 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 PLCG2P16885 1265 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 KRT15P19012 456 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 SFMBT2Q5VUG0 894 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 PHLDB2Q86SQ0 1253 aa18.55■□□□□ 0.56
SATB1-201ENST00000338745 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms