RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 DOCK2Q92608 1830 aa13.66□□□□□ -0.22
SLC28A1-202ENST00000338602 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 TCRBV5S4A2TA0A5A2 114 aa13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 IGHDP01880 384 aa13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 PPIL2Q13356 520 aa13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 LNPKQ9C0E8 428 aa13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
SLC28A1-202ENST00000338602 SNAPC2Q13487 334 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 OTUD7AQ8TE49 926 aaPredicted RBP13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 STAP2Q9UGK3 403 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
SLC28A1-202ENST00000338602 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 MBD4O95243 580 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 POLR3DP05423 398 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 CETPP11597 493 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 GJA5P36382 358 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 PDE1AP54750 535 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 NUCB1Q02818 461 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 CCL15Q16663 113 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 MCOLN1Q9GZU1 580 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 ARMT1Q9H993 441 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 ATP8A2Q9NTI2 1148 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 TSKSQ9UJT2 592 aa13.63□□□□□ -0.23
SLC28A1-202ENST00000338602 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 PRPF38BQ5VTL8 546 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 LCORLQ8N3X6 602 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 APPBP2Q92624 585 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 TBC1D2Q9BYX2 928 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 MCM9Q9NXL9 1143 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 SALL3Q9BXA9 1300 aa13.62□□□□□ -0.23
SLC28A1-202ENST00000338602 OTOFQ9HC10 1997 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 CXCL11O14625 94 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 IRF6O14896 467 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 GNAT2P19087 354 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 EHD4Q9H223 541 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 SERPINB13Q9UIV8 391 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 ZHX2Q9Y6X8 837 aa13.61□□□□□ -0.23
SLC28A1-202ENST00000338602 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 ASNSP08243 561 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 PTPRAP18433 802 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 CAP2P40123 477 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 SDR42E1Q8WUS8 393 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 MS4A4AQ96JQ5 239 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 PUS7LQ9H0K6 701 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 ZCCHC17Q9NP64 241 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-202ENST00000338602 TBC1D8O95759 1140 aa13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 BRI3BPQ8WY22 251 aa13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 CFHR5Q9BXR6 569 aa13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 KCNH4Q9UQ05 1017 aa13.59□□□□□ -0.23
SLC28A1-202ENST00000338602 FOCADQ5VW36 1801 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 USP17L5A8MUK1 530 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 IGF2BP3O00425 579 aaKnown RBP eCLIP13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 NEFLP07196 543 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 NOM1Q5C9Z4 860 aaKnown RBP13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 NACAP1Q9BZK3 213 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 CABP5Q9NP86 173 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 SWAP70Q9UH65 585 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.23
SLC28A1-202ENST00000338602 MYH7P12883 1935 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 PRKAB2O43741 272 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 APPP05067 770 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 SLURP2P0DP57 97 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 CERKLQ49MI3 558 aaPredicted RBP13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 OSBP2Q969R2 916 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 PTPN18Q99952 460 aa13.58□□□□□ -0.24
SLC28A1-202ENST00000338602 MYH1P12882 1939 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 GPR25O00155 361 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 GPAA1O43292 621 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms