RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 CYP21A2P08686 494 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 PRPHP41219 470 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 HSPA2P54652 639 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 CCDC91Q7Z6B0 441 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
HDAC5-202ENST00000336057 SERTAD1Q9UHV2 236 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 CTSWP56202 376 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 POLA2Q14181 598 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 WDHD1O75717 1129 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-202ENST00000336057 CTNNA2P26232 953 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 CNNM4Q6P4Q7 775 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-202ENST00000336057 LRRC8AQ8IWT6 810 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 BBXQ8WY36 941 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-202ENST00000336057 ZBTB9Q96C00 473 aa17.69■□□□□ 0.42
HDAC5-202ENST00000336057 CDCA7Q9BWT1 371 aaPredicted RBP17.69■□□□□ 0.42
HDAC5-202ENST00000336057 KRT9P35527 623 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 CCDC155Q8N6L0 562 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 ZMYM6O95789 1325 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 TRAF5O00463 557 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 CALRP27797 417 aaKnown RBP17.68■□□□□ 0.42
HDAC5-202ENST00000336057 FBXO18Q8NFZ0 1043 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 GPR108Q9NPR9 543 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDAC5-202ENST00000336057 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 PDE6AP16499 860 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
HDAC5-202ENST00000336057 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 USP37Q86T82 979 aa17.68■□□□□ 0.42
HDAC5-202ENST00000336057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■■■■□ 24.3
HDAC5-202ENST00000336057 SAP30BPQ9UHR5 308 aaKnown RBP17.68■□□□□ 0.42
HDAC5-202ENST00000336057 ZMYM1Q5SVZ6 1142 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 IFNL3Q8IZI9 196 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 TAB2Q9NYJ8 693 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
HDAC5-202ENST00000336057 NDUFA8P51970 172 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 PPARAQ07869 468 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 ATRIPQ8WXE1 791 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 A0A1W2PQ27 194 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 A0A1W2PQ64 194 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 A0A1W2PQD8 194 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 RASAL2Q9UJF2 1139 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 MADDQ8WXG6 1647 aa17.67■□□□□ 0.42
HDAC5-202ENST00000336057 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 FAM13AO94988 1023 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 NUP58Q9BVL2 599 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 GIGYF2Q6Y7W6 1299 aaKnown RBP17.66■□□□□ 0.42
HDAC5-202ENST00000336057 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 PYCARDQ9ULZ3 195 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
HDAC5-202ENST00000336057 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
HDAC5-202ENST00000336057 IFT81Q8WYA0 676 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 STAMQ92783 540 aa17.66■□□□□ 0.42
HDAC5-202ENST00000336057 GNPATO15228 680 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 BICD1Q96G01 975 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 SPHKAPQ2M3C7 1700 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 TNNC1P63316 161 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
HDAC5-202ENST00000336057 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 EBAG9O00559 213 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 RPL13P26373 211 aaKnown RBP17.65■□□□□ 0.42
HDAC5-202ENST00000336057 SCLT1Q96NL6 688 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 CLIC4Q9Y696 253 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
HDAC5-202ENST00000336057 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 JAKMIP2Q96AA8 810 aa17.65■□□□□ 0.42
HDAC5-202ENST00000336057 CIAO1O76071 339 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 LARGE1O95461 756 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 TXKP42681 527 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.42
HDAC5-202ENST00000336057 PAF1Q8N7H5 531 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 NELFBQ8WX92 580 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 INCENPQ9NQS7 918 aa17.64■□□□□ 0.42
HDAC5-202ENST00000336057 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
HDAC5-202ENST00000336057 NECTIN1Q15223 517 aa17.64■□□□□ 0.41
HDAC5-202ENST00000336057 KRBA2Q6ZNG9 492 aa17.64■□□□□ 0.41
HDAC5-202ENST00000336057 KRT25Q7Z3Z0 450 aa17.64■□□□□ 0.41
HDAC5-202ENST00000336057 FAM76AQ8TAV0 307 aa17.64■□□□□ 0.41
HDAC5-202ENST00000336057 UBE3CQ15386 1083 aa17.63■□□□□ 0.41
HDAC5-202ENST00000336057 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
HDAC5-202ENST00000336057 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
HDAC5-202ENST00000336057 ARHGAP31Q2M1Z3 1444 aa17.63■□□□□ 0.41
HDAC5-202ENST00000336057 ARAP3Q8WWN8 1544 aa17.63■□□□□ 0.41
HDAC5-202ENST00000336057 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms